Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SBNO1A3KN83 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.81■■□□□ 1.24
SBNO1A3KN83 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC22.81■■□□□ 1.24
SBNO1A3KN83 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SBNO1A3KN83 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC22.81■■□□□ 1.24
SBNO1A3KN83 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SBNO1A3KN83 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SBNO1A3KN83 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC22.81■■□□□ 1.24
SBNO1A3KN83 ZNF890P-202ENST00000530367 1156 ntBASIC22.81■■□□□ 1.24
SBNO1A3KN83 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC22.81■■□□□ 1.24
SBNO1A3KN83 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SBNO1A3KN83 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC22.81■■□□□ 1.24
SBNO1A3KN83 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
SBNO1A3KN83 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SBNO1A3KN83 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SBNO1A3KN83 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SBNO1A3KN83 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
SBNO1A3KN83 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SBNO1A3KN83 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SBNO1A3KN83 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.81■■□□□ 1.24
SBNO1A3KN83 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SBNO1A3KN83 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SBNO1A3KN83 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SBNO1A3KN83 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SBNO1A3KN83 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SBNO1A3KN83 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SBNO1A3KN83 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SBNO1A3KN83 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
SBNO1A3KN83 AC079776.1-201ENST00000401540 1152 ntBASIC22.8■■□□□ 1.24
SBNO1A3KN83 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SBNO1A3KN83 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC22.8■■□□□ 1.24
SBNO1A3KN83 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC22.8■■□□□ 1.24
SBNO1A3KN83 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SBNO1A3KN83 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC22.8■■□□□ 1.24
SBNO1A3KN83 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SBNO1A3KN83 GIMAP3P-201ENST00000495150 836 ntBASIC22.8■■□□□ 1.24
SBNO1A3KN83 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SBNO1A3KN83 RNA5-8SN1-201ENST00000610460 153 ntBASIC22.8■■□□□ 1.24
SBNO1A3KN83 RNA5-8SN5-202ENST00000612463 153 ntBASIC22.8■■□□□ 1.24
SBNO1A3KN83 RNA5-8SN4-201ENST00000613359 153 ntBASIC22.8■■□□□ 1.24
SBNO1A3KN83 RNA5-8SN5-201ENST00000619471 153 ntBASIC22.8■■□□□ 1.24
SBNO1A3KN83 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SBNO1A3KN83 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
SBNO1A3KN83 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
SBNO1A3KN83 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC22.8■■□□□ 1.24
SBNO1A3KN83 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
SBNO1A3KN83 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC22.79■■□□□ 1.24
SBNO1A3KN83 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
SBNO1A3KN83 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC22.79■■□□□ 1.24
SBNO1A3KN83 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SBNO1A3KN83 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
SBNO1A3KN83 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SBNO1A3KN83 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SBNO1A3KN83 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC22.79■■□□□ 1.24
SBNO1A3KN83 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC22.79■■□□□ 1.24
SBNO1A3KN83 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC22.79■■□□□ 1.24
SBNO1A3KN83 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC22.79■■□□□ 1.24
SBNO1A3KN83 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
SBNO1A3KN83 BANF1P1-201ENST00000553684 263 ntBASIC22.79■■□□□ 1.24
SBNO1A3KN83 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SBNO1A3KN83 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC22.79■■□□□ 1.24
SBNO1A3KN83 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SBNO1A3KN83 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SBNO1A3KN83 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
SBNO1A3KN83 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SBNO1A3KN83 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SBNO1A3KN83 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.79■■□□□ 1.24
SBNO1A3KN83 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC22.79■■□□□ 1.24
SBNO1A3KN83 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SBNO1A3KN83 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SBNO1A3KN83 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.79■■□□□ 1.24
SBNO1A3KN83 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SBNO1A3KN83 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
SBNO1A3KN83 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SBNO1A3KN83 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SBNO1A3KN83 FAM220BP-201ENST00000377689 816 ntBASIC22.78■■□□□ 1.24
SBNO1A3KN83 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC22.78■■□□□ 1.24
SBNO1A3KN83 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC22.78■■□□□ 1.24
SBNO1A3KN83 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SBNO1A3KN83 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC22.78■■□□□ 1.24
SBNO1A3KN83 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC22.78■■□□□ 1.24
SBNO1A3KN83 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC22.78■■□□□ 1.24
SBNO1A3KN83 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC22.78■■□□□ 1.24
SBNO1A3KN83 KRT18P34-201ENST00000488218 1270 ntBASIC22.78■■□□□ 1.24
SBNO1A3KN83 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC22.78■■□□□ 1.24
SBNO1A3KN83 CYP2A7P1-201ENST00000595391 815 ntBASIC22.78■■□□□ 1.24
SBNO1A3KN83 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC22.78■■□□□ 1.24
SBNO1A3KN83 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
SBNO1A3KN83 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SBNO1A3KN83 AC007541.1-201ENST00000570282 1469 ntBASIC22.78■■□□□ 1.24
SBNO1A3KN83 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SBNO1A3KN83 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SBNO1A3KN83 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
SBNO1A3KN83 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.78■■□□□ 1.24
SBNO1A3KN83 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
SBNO1A3KN83 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SBNO1A3KN83 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
SBNO1A3KN83 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
SBNO1A3KN83 CETN4P-206ENST00000642099 2168 ntBASIC22.78■■□□□ 1.24
SBNO1A3KN83 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms