Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 GPR32P1-201ENST00000601788 811 ntBASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 AC099063.4-201ENST00000641099 1602 ntBASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 PRORSD1P-201ENST00000295112 541 ntBASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 MIR935-201ENST00000401179 91 ntBASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.15
TCRBV3S1A0A5B6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
TCRBV3S1A0A5B6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TCRBV3S1A0A5B6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
TCRBV3S1A0A5B6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TCRBV3S1A0A5B6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TCRBV3S1A0A5B6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 AC098590.1-201ENST00000468126 897 ntBASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms