Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 AC064836.3-201ENST00000607928 673 ntBASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 AL022326.1-202ENST00000641533 845 ntBASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB1Q9Y5F3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 AC004817.3-201ENST00000602957 2129 ntBASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 AC211486.1-202ENST00000416371 468 ntBASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 AC211476.1-201ENST00000503899 468 ntBASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 AL596442.2-201ENST00000610240 980 ntBASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 AC012313.1-201ENST00000593393 3059 ntBASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHB1Q9Y5F3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 OR6D1P-203ENST00000641209 4860 ntBASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 AC060834.1-201ENST00000443027 2032 ntBASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 LINC00982-205ENST00000420957 435 ntBASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 MTDHP5-201ENST00000598980 586 ntBASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 MIR1199-201ENST00000621445 119 ntBASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PCDHB1Q9Y5F3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms