Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RTCBQ9Y3I0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTCBQ9Y3I0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTCBQ9Y3I0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RTCBQ9Y3I0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.27■■□□□ 1
RTCBQ9Y3I0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTCBQ9Y3I0 AC098818.2-201ENST00000564925 2320 ntBASIC21.27■■□□□ 1
RTCBQ9Y3I0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC21.27■■□□□ 1
RTCBQ9Y3I0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTCBQ9Y3I0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTCBQ9Y3I0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTCBQ9Y3I0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTCBQ9Y3I0 HLA-H-201ENST00000383620 1096 ntBASIC21.27■■□□□ 1
RTCBQ9Y3I0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.27■■□□□ 1
RTCBQ9Y3I0 GPR53P-205ENST00000457298 1084 ntBASIC21.27■■□□□ 1
RTCBQ9Y3I0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 API5-211ENST00000534695 560 ntTSL 5 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTCBQ9Y3I0 CYP2A7P1-201ENST00000595391 815 ntBASIC21.27■■□□□ 1
RTCBQ9Y3I0 LINC00896-202ENST00000609602 2128 ntBASIC21.27■■□□□ 1
RTCBQ9Y3I0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 TEX28P1-201ENST00000613479 1221 ntBASIC21.27■■□□□ 1
RTCBQ9Y3I0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTCBQ9Y3I0 TEX28P2-201ENST00000617764 1221 ntBASIC21.27■■□□□ 1
RTCBQ9Y3I0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.27■■□□□ 1
RTCBQ9Y3I0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTCBQ9Y3I0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTCBQ9Y3I0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTCBQ9Y3I0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.27■■□□□ 1
RTCBQ9Y3I0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.27■□□□□ 0.99
RTCBQ9Y3I0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 AC138969.3-201ENST00000546612 1459 ntBASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 AC138932.2-201ENST00000548268 1459 ntBASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 AC126755.4-201ENST00000549796 1459 ntBASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 RNF165-205ENST00000588679 2904 ntBASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 LINC00895-201ENST00000629028 1637 ntBASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 TNXA-203ENST00000507684 2038 ntBASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 AL353779.1-201ENST00000434793 351 ntBASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 IGHV3-71-201ENST00000523324 359 ntBASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
RTCBQ9Y3I0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 FOXO1B-201ENST00000504678 1527 ntBASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 AL355312.1-201ENST00000407115 2176 ntBASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 AL353705.2-201ENST00000428243 662 ntBASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms