Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 HMGA1P7-201ENST00000406908 502 ntBASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 AC211486.1-202ENST00000416371 468 ntBASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 AC004967.1-201ENST00000453589 447 ntBASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 AC211476.1-201ENST00000503899 468 ntBASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 AP002472.1-201ENST00000577490 586 ntBASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 AC091812.2-201ENST00000619081 385 ntBASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 TUBB8P12-201ENST00000308911 1335 ntBASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 TUBB7P-202ENST00000428444 1305 ntBASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 TUBB8P7-204ENST00000567960 1332 ntBASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN1Q9UMX0 ELL2P1-201ENST00000413990 1906 ntBASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 AC092919.2-201ENST00000623631 1645 ntBASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 ACTG1P14-201ENST00000446382 1122 ntBASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 MPDU1-223ENST00000582151 728 ntBASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 MIR4469-201ENST00000583919 79 ntBASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 SLC22A20-204ENST00000530038 1673 ntBASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.21■□□□□ 0.51
UBQLN1Q9UMX0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 AC140658.5-201ENST00000438532 169 ntBASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 AC112191.1-201ENST00000523689 701 ntBASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms