Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SMOQ99835 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMOQ99835 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SMOQ99835 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMOQ99835 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SMOQ99835 TUBB8P12-201ENST00000308911 1335 ntBASIC17.8■□□□□ 0.44
SMOQ99835 TUBB7P-202ENST00000428444 1305 ntBASIC17.8■□□□□ 0.44
SMOQ99835 TUBB8P7-204ENST00000567960 1332 ntBASIC17.8■□□□□ 0.44
SMOQ99835 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMOQ99835 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMOQ99835 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMOQ99835 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMOQ99835 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SMOQ99835 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMOQ99835 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMOQ99835 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.8■□□□□ 0.44
SMOQ99835 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SMOQ99835 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SMOQ99835 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.8■□□□□ 0.44
SMOQ99835 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.8■□□□□ 0.44
SMOQ99835 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMOQ99835 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.8■□□□□ 0.44
SMOQ99835 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SMOQ99835 AL031432.2-201ENST00000566714 459 ntBASIC17.8■□□□□ 0.44
SMOQ99835 AL928711.1-201ENST00000570165 459 ntBASIC17.8■□□□□ 0.44
SMOQ99835 AP002472.1-201ENST00000577490 586 ntBASIC17.8■□□□□ 0.44
SMOQ99835 MIR4492-201ENST00000581627 80 ntBASIC17.8■□□□□ 0.44
SMOQ99835 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.8■□□□□ 0.44
SMOQ99835 AC068137.2-201ENST00000605408 478 ntBASIC17.8■□□□□ 0.44
SMOQ99835 AL078644.1-201ENST00000609881 752 ntBASIC17.8■□□□□ 0.44
SMOQ99835 AC006538.3-201ENST00000612495 578 ntBASIC17.8■□□□□ 0.44
SMOQ99835 AC012569.1-201ENST00000591191 1524 ntBASIC17.8■□□□□ 0.44
SMOQ99835 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.8■□□□□ 0.44
SMOQ99835 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
SMOQ99835 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMOQ99835 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.8■□□□□ 0.44
SMOQ99835 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
SMOQ99835 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.8■□□□□ 0.44
SMOQ99835 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SMOQ99835 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMOQ99835 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.8■□□□□ 0.44
SMOQ99835 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMOQ99835 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMOQ99835 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMOQ99835 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.79■□□□□ 0.44
SMOQ99835 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.79■□□□□ 0.44
SMOQ99835 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SMOQ99835 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 AC131009.4-201ENST00000624048 1740 ntBASIC17.79■□□□□ 0.44
SMOQ99835 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.79■□□□□ 0.44
SMOQ99835 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.79■□□□□ 0.44
SMOQ99835 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.79■□□□□ 0.44
SMOQ99835 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.79■□□□□ 0.44
SMOQ99835 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.79■□□□□ 0.44
SMOQ99835 AC139530.3-201ENST00000620344 690 ntBASIC17.79■□□□□ 0.44
SMOQ99835 C20orf181-201ENST00000623918 480 ntBASIC17.79■□□□□ 0.44
SMOQ99835 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.79■□□□□ 0.44
SMOQ99835 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
SMOQ99835 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SMOQ99835 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SMOQ99835 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMOQ99835 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.78■□□□□ 0.44
SMOQ99835 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SMOQ99835 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SMOQ99835 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SMOQ99835 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.78■□□□□ 0.44
SMOQ99835 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.78■□□□□ 0.44
SMOQ99835 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SMOQ99835 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.78■□□□□ 0.44
SMOQ99835 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SMOQ99835 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.78■□□□□ 0.44
SMOQ99835 MIR3687-2-201ENST00000577708 61 ntBASIC17.78■□□□□ 0.44
SMOQ99835 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 MIR3687-1-201ENST00000614492 61 ntBASIC17.78■□□□□ 0.44
SMOQ99835 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms