Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC14.71□□□□□ -0.06
COL12A1Q99715 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.71□□□□□ -0.06
COL12A1Q99715 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
COL12A1Q99715 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.71□□□□□ -0.06
COL12A1Q99715 IGHV3-52-201ENST00000519770 353 ntBASIC14.71□□□□□ -0.06
COL12A1Q99715 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.71□□□□□ -0.06
COL12A1Q99715 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
COL12A1Q99715 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.71□□□□□ -0.06
COL12A1Q99715 RARRES2P9-201ENST00000565168 469 ntBASIC14.71□□□□□ -0.06
COL12A1Q99715 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.71□□□□□ -0.06
COL12A1Q99715 AL589739.1-201ENST00000607720 493 ntBASIC14.71□□□□□ -0.06
COL12A1Q99715 MIR8072-201ENST00000614241 80 ntBASIC14.71□□□□□ -0.06
COL12A1Q99715 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
COL12A1Q99715 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
COL12A1Q99715 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
COL12A1Q99715 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
COL12A1Q99715 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.71□□□□□ -0.06
COL12A1Q99715 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.7□□□□□ -0.06
COL12A1Q99715 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL12A1Q99715 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL12A1Q99715 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.7□□□□□ -0.06
COL12A1Q99715 AC002558.1-201ENST00000488906 803 ntBASIC14.7□□□□□ -0.06
COL12A1Q99715 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.7□□□□□ -0.06
COL12A1Q99715 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
COL12A1Q99715 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.7□□□□□ -0.06
COL12A1Q99715 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL12A1Q99715 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.7□□□□□ -0.06
COL12A1Q99715 KRT8P19-201ENST00000551916 1455 ntBASIC14.7□□□□□ -0.06
COL12A1Q99715 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL12A1Q99715 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.7□□□□□ -0.06
COL12A1Q99715 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.7□□□□□ -0.06
COL12A1Q99715 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
COL12A1Q99715 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL12A1Q99715 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL12A1Q99715 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL12A1Q99715 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.7□□□□□ -0.06
COL12A1Q99715 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.7□□□□□ -0.06
COL12A1Q99715 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.7□□□□□ -0.06
COL12A1Q99715 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL12A1Q99715 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
COL12A1Q99715 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
COL12A1Q99715 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL12A1Q99715 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
COL12A1Q99715 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
COL12A1Q99715 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL12A1Q99715 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
COL12A1Q99715 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL12A1Q99715 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
COL12A1Q99715 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL12A1Q99715 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.69□□□□□ -0.06
COL12A1Q99715 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.69□□□□□ -0.06
COL12A1Q99715 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.69□□□□□ -0.06
COL12A1Q99715 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.69□□□□□ -0.06
COL12A1Q99715 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.69□□□□□ -0.06
COL12A1Q99715 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.69□□□□□ -0.06
COL12A1Q99715 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.69□□□□□ -0.06
COL12A1Q99715 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.69□□□□□ -0.06
COL12A1Q99715 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.69□□□□□ -0.06
COL12A1Q99715 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
COL12A1Q99715 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 MPRIPP1-201ENST00000452433 1089 ntBASIC14.69□□□□□ -0.06
COL12A1Q99715 LDHBP1-201ENST00000455730 1119 ntBASIC14.69□□□□□ -0.06
COL12A1Q99715 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
COL12A1Q99715 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 SPCS2P2-201ENST00000603270 608 ntBASIC14.69□□□□□ -0.06
COL12A1Q99715 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
COL12A1Q99715 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
COL12A1Q99715 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.69□□□□□ -0.06
COL12A1Q99715 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.69□□□□□ -0.06
COL12A1Q99715 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL12A1Q99715 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.68□□□□□ -0.06
COL12A1Q99715 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.68□□□□□ -0.06
COL12A1Q99715 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.68□□□□□ -0.06
COL12A1Q99715 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL12A1Q99715 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
COL12A1Q99715 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL12A1Q99715 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.68□□□□□ -0.06
COL12A1Q99715 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.68□□□□□ -0.06
COL12A1Q99715 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.68□□□□□ -0.06
COL12A1Q99715 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.68□□□□□ -0.06
COL12A1Q99715 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.68□□□□□ -0.06
COL12A1Q99715 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL12A1Q99715 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL12A1Q99715 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL12A1Q99715 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.68□□□□□ -0.06
COL12A1Q99715 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms