Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRIM47Q96LD4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.93■□□□□ 0.78
TRIM47Q96LD4 PMS2P4-201ENST00000412466 1052 ntBASIC19.93■□□□□ 0.78
TRIM47Q96LD4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM47Q96LD4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 AL627223.1-201ENST00000416693 442 ntBASIC19.92■□□□□ 0.78
TRIM47Q96LD4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 STK19B-204ENST00000512515 211 ntBASIC19.92■□□□□ 0.78
TRIM47Q96LD4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.92■□□□□ 0.78
TRIM47Q96LD4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 AC009093.7-201ENST00000623853 1223 ntBASIC19.92■□□□□ 0.78
TRIM47Q96LD4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 AC100803.2-201ENST00000562459 1963 ntBASIC19.92■□□□□ 0.78
TRIM47Q96LD4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM47Q96LD4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 PI4KAP1-204ENST00000612579 1703 ntBASIC19.91■□□□□ 0.78
TRIM47Q96LD4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 INGX-202ENST00000489074 768 ntBASIC19.91■□□□□ 0.78
TRIM47Q96LD4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM47Q96LD4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms