Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 TUBB8P12-201ENST00000308911 1335 ntBASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 TUBB7P-202ENST00000428444 1305 ntBASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 TUBB8P7-204ENST00000567960 1332 ntBASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 GPX1P2-201ENST00000429271 606 ntBASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 AC074386.1-202ENST00000463561 864 ntBASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 AC010327.4-202ENST00000591484 748 ntBASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMARCD1Q96GM5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 PKD1P1-201ENST00000458669 6805 ntBASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 LETM1P2-201ENST00000597330 2178 ntBASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 UPF3AP3-201ENST00000420996 769 ntBASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 MIR3687-2-201ENST00000577708 61 ntBASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 MIR4515-201ENST00000584082 81 ntBASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 MIR3687-1-201ENST00000614492 61 ntBASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMARCD1Q96GM5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 MIR1233-2-201ENST00000408138 82 ntBASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 MIR1233-1-201ENST00000408722 82 ntBASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 HCG4-201ENST00000418983 998 ntBASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 AL031432.2-201ENST00000566714 459 ntBASIC17.86■□□□□ 0.45
SMARCD1Q96GM5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms