Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 RN7SL440P-201ENST00000577855 343 ntBASIC17.31■□□□□ 0.36
PTCD2Q8WV60 AC064862.7-201ENST00000604520 867 ntBASIC17.31■□□□□ 0.36
PTCD2Q8WV60 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 AC106886.4-201ENST00000623557 2502 ntBASIC17.3■□□□□ 0.36
PTCD2Q8WV60 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 Z97985.1-201ENST00000332270 946 ntBASIC17.3■□□□□ 0.36
PTCD2Q8WV60 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 EMC4-208ENST00000559078 599 ntTSL 3 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 AC116407.3-201ENST00000623905 1129 ntBASIC17.3■□□□□ 0.36
PTCD2Q8WV60 AC008267.7-201ENST00000624570 1194 ntBASIC17.3■□□□□ 0.36
PTCD2Q8WV60 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTCD2Q8WV60 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 PRYP5-201ENST00000451909 266 ntBASIC17.29■□□□□ 0.36
PTCD2Q8WV60 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 AL671883.3-201ENST00000603274 991 ntBASIC17.29■□□□□ 0.36
PTCD2Q8WV60 ACTG1P22-201ENST00000603793 1099 ntBASIC17.29■□□□□ 0.36
PTCD2Q8WV60 BX640515.1-201ENST00000617215 977 ntBASIC17.29■□□□□ 0.36
PTCD2Q8WV60 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 AC005915.1-201ENST00000624912 2018 ntBASIC17.29■□□□□ 0.36
PTCD2Q8WV60 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCD2Q8WV60 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms