Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 AL592309.1-201ENST00000443127 649 ntBASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 CR383656.12-201ENST00000549567 513 ntBASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 AC109462.3-201ENST00000573934 613 ntBASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 AP001059.3-201ENST00000619053 235 ntBASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 LINC00896-202ENST00000609602 2128 ntBASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
U2AF1L4Q8WU68 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 FO538757.1-201ENST00000623083 1397 ntBASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 KRT18P32-201ENST00000424695 1287 ntBASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 AC125807.1-201ENST00000483097 614 ntBASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 STK25P1-201ENST00000585406 838 ntBASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 MIR6752-201ENST00000618442 71 ntBASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 AL358472.5-202ENST00000641448 1267 ntBASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
U2AF1L4Q8WU68 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 FAM58DP-201ENST00000428076 619 ntBASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 CRB3P1-201ENST00000449338 276 ntBASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms