Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC17A8Q8NDX2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 GPR89P-201ENST00000407924 1495 ntBASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 ACTG1P4-201ENST00000425123 1122 ntBASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 AC008761.3-201ENST00000624803 892 ntBASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 AC020916.1-201ENST00000587762 1774 ntBASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC17A8Q8NDX2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 NKAPP1-205ENST00000585790 367 ntBASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 LINC00628-201ENST00000628516 1289 ntBASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 PGM5P2-202ENST00000637225 1043 ntBASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 AC068587.10-201ENST00000641210 219 ntBASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC17A8Q8NDX2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SLC17A8Q8NDX2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SLC17A8Q8NDX2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SLC17A8Q8NDX2 AL135999.2-201ENST00000622438 1686 ntBASIC19.14■□□□□ 0.66
SLC17A8Q8NDX2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC17A8Q8NDX2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
SLC17A8Q8NDX2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.14■□□□□ 0.66
SLC17A8Q8NDX2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 FAM207CP-201ENST00000443486 507 ntBASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 AC067863.1-201ENST00000494933 530 ntBASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms