Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 LINC02012-201ENST00000608206 1725 ntBASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 WASH4P-201ENST00000564273 1246 ntBASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 MIR4492-201ENST00000581627 80 ntBASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 AC017083.2-201ENST00000608069 979 ntBASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 AC012569.1-201ENST00000591191 1524 ntBASIC26.3■■□□□ 1.8
CFAP43Q8NDM7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 MIR4453-201ENST00000584019 89 ntBASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 AL138828.2-201ENST00000615812 383 ntBASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP43Q8NDM7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 CYP2A7P1-201ENST00000595391 815 ntBASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 PGF-202ENST00000405431 666 ntTSL 5 BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 FST-202ENST00000396947 2538 ntTSL 5 BASIC26.28■■□□□ 1.8
CFAP43Q8NDM7 LINC00896-202ENST00000609602 2128 ntBASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 AC027369.6-201ENST00000525520 931 ntBASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 AC067852.2-201ENST00000590513 2313 ntBASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CFAP43Q8NDM7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.8
CFAP43Q8NDM7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC26.26■■□□□ 1.79
CFAP43Q8NDM7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC26.26■■□□□ 1.79
CFAP43Q8NDM7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CFAP43Q8NDM7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC26.26■■□□□ 1.79
CFAP43Q8NDM7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
CFAP43Q8NDM7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CFAP43Q8NDM7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC26.26■■□□□ 1.79
CFAP43Q8NDM7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CFAP43Q8NDM7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms