Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AC097637.2-201ENST00000624096 1997 ntBASIC17.57■□□□□ 0.4
PAF1Q8N7H5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 RPS2P1-201ENST00000434010 821 ntBASIC17.57■□□□□ 0.4
PAF1Q8N7H5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 AP001005.1-201ENST00000571755 1248 ntBASIC17.57■□□□□ 0.4
PAF1Q8N7H5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 AC148477.5-201ENST00000625164 1645 ntBASIC17.57■□□□□ 0.4
PAF1Q8N7H5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 AC009078.2-202ENST00000463353 338 ntBASIC17.56■□□□□ 0.4
PAF1Q8N7H5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.56■□□□□ 0.4
PAF1Q8N7H5 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.56■□□□□ 0.4
PAF1Q8N7H5 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PAF1Q8N7H5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 AC139887.3-201ENST00000568585 713 ntBASIC17.55■□□□□ 0.4
PAF1Q8N7H5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 MIR1199-201ENST00000621445 119 ntBASIC17.55■□□□□ 0.4
PAF1Q8N7H5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 SIGLEC16-201ENST00000599858 1437 ntBASIC17.55■□□□□ 0.4
PAF1Q8N7H5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PAF1Q8N7H5 AL161772.1-201ENST00000610494 4412 ntBASIC17.54■□□□□ 0.4
PAF1Q8N7H5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms