Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf42Q8N5U0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf42Q8N5U0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.26□□□□□ -0.13
C11orf42Q8N5U0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf42Q8N5U0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf42Q8N5U0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C11orf42Q8N5U0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 AC016396.2-201ENST00000562575 1417 ntBASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 CROCCP2-202ENST00000412962 2773 ntBASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 MRPL3P1-201ENST00000400109 1033 ntBASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 AC009078.2-202ENST00000463353 338 ntBASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 RNA5SP419-201ENST00000515908 135 ntBASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 AC064862.7-201ENST00000604520 867 ntBASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
C11orf42Q8N5U0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 KRT18P67-201ENST00000432816 1264 ntBASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 FDX1P1-201ENST00000449115 551 ntBASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 SLC25A6P4-201ENST00000586535 553 ntBASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf42Q8N5U0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms