Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 SPDYE21P-201ENST00000413323 827 ntBASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 AC073592.4-201ENST00000623827 446 ntBASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 AC060834.1-201ENST00000443027 2032 ntBASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 AC073621.1-201ENST00000392730 636 ntBASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 KRT18P27-201ENST00000427733 1299 ntBASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 DNAJB3-201ENST00000446806 729 ntBASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 AC108751.1-201ENST00000490852 363 ntBASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC33Q8N5R6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 AC092053.1-201ENST00000605787 1936 ntBASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 KLF4P1-201ENST00000412782 1185 ntBASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 PRYP5-201ENST00000451909 266 ntBASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 STK19B-204ENST00000512515 211 ntBASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 AC136632.2-201ENST00000512891 861 ntBASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 AC002347.1-201ENST00000569543 541 ntBASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 AC064836.3-201ENST00000607928 673 ntBASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC33Q8N5R6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CCDC33Q8N5R6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC33Q8N5R6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms