Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 AC063926.2-201ENST00000623766 1308 ntBASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 MIR943-201ENST00000401286 94 ntBASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 SPDYE7P-202ENST00000420373 878 ntBASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 AC107890.1-201ENST00000422478 521 ntBASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 FAM58DP-201ENST00000428076 619 ntBASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 TERF1P3-201ENST00000505638 1227 ntBASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 AC087641.1-201ENST00000557561 1021 ntBASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 AF228730.6-201ENST00000641497 218 ntBASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 AC084121.4-201ENST00000641598 221 ntBASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 AC084121.3-201ENST00000641716 218 ntBASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 AC105233.6-201ENST00000642093 218 ntBASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 AF228730.8-201ENST00000642140 221 ntBASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPOQ8N3V7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 GPS2P2-201ENST00000430745 888 ntBASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 DUX4L17-201ENST00000557360 1267 ntBASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 AC140878.1-201ENST00000565277 250 ntBASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SYNPOQ8N3V7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SYNPOQ8N3V7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
SYNPOQ8N3V7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.27■□□□□ 0.35
SYNPOQ8N3V7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SYNPOQ8N3V7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms