Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLX4Q8IY92 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.47■□□□□ 0.87
SLX4Q8IY92 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLX4Q8IY92 AC098614.1-201ENST00000368528 745 ntBASIC20.47■□□□□ 0.87
SLX4Q8IY92 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLX4Q8IY92 TMEM14DP-201ENST00000422205 345 ntBASIC20.47■□□□□ 0.87
SLX4Q8IY92 RNA5SP410-201ENST00000516285 106 ntBASIC20.47■□□□□ 0.87
SLX4Q8IY92 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLX4Q8IY92 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SLX4Q8IY92 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.47■□□□□ 0.87
SLX4Q8IY92 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLX4Q8IY92 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.47■□□□□ 0.87
SLX4Q8IY92 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SLX4Q8IY92 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.47■□□□□ 0.87
SLX4Q8IY92 ABALON-201ENST00000629058 1903 ntBASIC20.47■□□□□ 0.87
SLX4Q8IY92 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLX4Q8IY92 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SLX4Q8IY92 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLX4Q8IY92 SPDYE19P-201ENST00000338590 713 ntBASIC20.46■□□□□ 0.87
SLX4Q8IY92 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 SNX29P1-201ENST00000548357 1007 ntBASIC20.46■□□□□ 0.87
SLX4Q8IY92 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLX4Q8IY92 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 MIR6805-201ENST00000615055 62 ntBASIC20.46■□□□□ 0.87
SLX4Q8IY92 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 BTBD7P1-201ENST00000447253 1453 ntBASIC20.46■□□□□ 0.87
SLX4Q8IY92 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLX4Q8IY92 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLX4Q8IY92 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLX4Q8IY92 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLX4Q8IY92 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLX4Q8IY92 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLX4Q8IY92 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLX4Q8IY92 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLX4Q8IY92 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLX4Q8IY92 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
SLX4Q8IY92 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLX4Q8IY92 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLX4Q8IY92 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLX4Q8IY92 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLX4Q8IY92 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLX4Q8IY92 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.45■□□□□ 0.86
SLX4Q8IY92 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.45■□□□□ 0.86
SLX4Q8IY92 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLX4Q8IY92 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.45■□□□□ 0.86
SLX4Q8IY92 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.45■□□□□ 0.86
SLX4Q8IY92 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLX4Q8IY92 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLX4Q8IY92 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SLX4Q8IY92 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.45■□□□□ 0.86
SLX4Q8IY92 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SLX4Q8IY92 AC105021.1-202ENST00000570572 669 ntBASIC20.45■□□□□ 0.86
SLX4Q8IY92 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.45■□□□□ 0.86
SLX4Q8IY92 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.45■□□□□ 0.86
SLX4Q8IY92 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLX4Q8IY92 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.45■□□□□ 0.86
SLX4Q8IY92 SPTSSB-204ENST00000617024 1292 ntBASIC20.45■□□□□ 0.86
SLX4Q8IY92 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.45■□□□□ 0.86
SLX4Q8IY92 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.45■□□□□ 0.86
SLX4Q8IY92 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLX4Q8IY92 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.45■□□□□ 0.86
SLX4Q8IY92 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLX4Q8IY92 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.44■□□□□ 0.86
SLX4Q8IY92 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLX4Q8IY92 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.44■□□□□ 0.86
SLX4Q8IY92 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.44■□□□□ 0.86
SLX4Q8IY92 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.44■□□□□ 0.86
SLX4Q8IY92 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.44■□□□□ 0.86
SLX4Q8IY92 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.44■□□□□ 0.86
SLX4Q8IY92 AL033527.4-201ENST00000641026 673 ntBASIC20.44■□□□□ 0.86
SLX4Q8IY92 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SLX4Q8IY92 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SLX4Q8IY92 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLX4Q8IY92 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLX4Q8IY92 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLX4Q8IY92 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLX4Q8IY92 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.44■□□□□ 0.86
SLX4Q8IY92 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.44■□□□□ 0.86
SLX4Q8IY92 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLX4Q8IY92 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLX4Q8IY92 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.44■□□□□ 0.86
SLX4Q8IY92 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.44■□□□□ 0.86
SLX4Q8IY92 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLX4Q8IY92 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.44■□□□□ 0.86
SLX4Q8IY92 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLX4Q8IY92 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.44■□□□□ 0.86
SLX4Q8IY92 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms