Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBE3BQ7Z3V4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.16■□□□□ 0.98
UBE3BQ7Z3V4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBE3BQ7Z3V4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBE3BQ7Z3V4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
UBE3BQ7Z3V4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.16■□□□□ 0.98
UBE3BQ7Z3V4 AC027796.2-201ENST00000575326 344 ntBASIC21.16■□□□□ 0.98
UBE3BQ7Z3V4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.16■□□□□ 0.98
UBE3BQ7Z3V4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.16■□□□□ 0.98
UBE3BQ7Z3V4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
UBE3BQ7Z3V4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBE3BQ7Z3V4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.16■□□□□ 0.98
UBE3BQ7Z3V4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBE3BQ7Z3V4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBE3BQ7Z3V4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 TIMM8BP1-201ENST00000452384 211 ntBASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE3BQ7Z3V4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBE3BQ7Z3V4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
UBE3BQ7Z3V4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.14■□□□□ 0.98
UBE3BQ7Z3V4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBE3BQ7Z3V4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.14■□□□□ 0.98
UBE3BQ7Z3V4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
UBE3BQ7Z3V4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBE3BQ7Z3V4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 HCG4-201ENST00000418983 998 ntBASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 AL671277.1-201ENST00000429656 993 ntBASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 KRT8P48-201ENST00000515599 1220 ntBASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 MPDU1-223ENST00000582151 728 ntBASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 AL009183.1-201ENST00000603760 355 ntBASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 AC131009.4-201ENST00000624048 1740 ntBASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 AC106820.2-201ENST00000563775 3264 ntBASIC21.14■□□□□ 0.97
UBE3BQ7Z3V4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 AL021920.2-201ENST00000624828 1351 ntBASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBE3BQ7Z3V4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms