Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 HTR5BP-201ENST00000430851 1154 ntBASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 AC023141.13-201ENST00000604991 943 ntBASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 AC106820.2-201ENST00000563775 3264 ntBASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 AC092919.2-201ENST00000623631 1645 ntBASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 FAM185BP-201ENST00000443595 716 ntBASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 C20orf181-201ENST00000623918 480 ntBASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEF17Q5VTA0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 AC074386.1-202ENST00000463561 864 ntBASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 AL031432.2-201ENST00000566714 459 ntBASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 AL928711.1-201ENST00000570165 459 ntBASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms