Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.11□□□□□ -0.47
PRKDCP78527 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.11□□□□□ -0.47
PRKDCP78527 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.11□□□□□ -0.47
PRKDCP78527 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.11□□□□□ -0.47
PRKDCP78527 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.11□□□□□ -0.47
PRKDCP78527 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.11□□□□□ -0.47
PRKDCP78527 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC12.11□□□□□ -0.47
PRKDCP78527 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PRKDCP78527 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PRKDCP78527 FLJ13224-201ENST00000313737 1514 ntBASIC12.11□□□□□ -0.47
PRKDCP78527 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRKDCP78527 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
PRKDCP78527 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRKDCP78527 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
PRKDCP78527 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRKDCP78527 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRKDCP78527 EFS-203ENST00000429593 2610 ntTSL 2 BASIC12.11□□□□□ -0.47
PRKDCP78527 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PRKDCP78527 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRKDCP78527 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRKDCP78527 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRKDCP78527 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.11□□□□□ -0.47
PRKDCP78527 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.11□□□□□ -0.47
PRKDCP78527 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC12.11□□□□□ -0.47
PRKDCP78527 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.11□□□□□ -0.47
PRKDCP78527 AC020765.3-201ENST00000613051 740 ntBASIC12.11□□□□□ -0.47
PRKDCP78527 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRKDCP78527 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.11□□□□□ -0.47
PRKDCP78527 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRKDCP78527 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
PRKDCP78527 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PRKDCP78527 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PRKDCP78527 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.1□□□□□ -0.47
PRKDCP78527 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
PRKDCP78527 AL353705.2-201ENST00000428243 662 ntBASIC12.1□□□□□ -0.47
PRKDCP78527 KRT18P34-201ENST00000488218 1270 ntBASIC12.1□□□□□ -0.47
PRKDCP78527 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.1□□□□□ -0.47
PRKDCP78527 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.1□□□□□ -0.47
PRKDCP78527 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.1□□□□□ -0.47
PRKDCP78527 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
PRKDCP78527 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
PRKDCP78527 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
PRKDCP78527 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PRKDCP78527 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.1□□□□□ -0.47
PRKDCP78527 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.1□□□□□ -0.47
PRKDCP78527 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.1□□□□□ -0.47
PRKDCP78527 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PRKDCP78527 BOLA2P3-201ENST00000404566 256 ntBASIC12.1□□□□□ -0.47
PRKDCP78527 KRT43P-201ENST00000434019 910 ntBASIC12.1□□□□□ -0.47
PRKDCP78527 RN7SL560P-201ENST00000577943 264 ntBASIC12.1□□□□□ -0.47
PRKDCP78527 AL022328.1-201ENST00000610050 478 ntBASIC12.1□□□□□ -0.47
PRKDCP78527 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PRKDCP78527 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
PRKDCP78527 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PRKDCP78527 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
PRKDCP78527 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PRKDCP78527 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PRKDCP78527 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PRKDCP78527 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PRKDCP78527 AC005332.7-201ENST00000614046 2005 ntBASIC12.1□□□□□ -0.47
PRKDCP78527 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PRKDCP78527 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.1□□□□□ -0.47
PRKDCP78527 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.1□□□□□ -0.47
PRKDCP78527 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
PRKDCP78527 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.1□□□□□ -0.47
PRKDCP78527 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.1□□□□□ -0.47
PRKDCP78527 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PRKDCP78527 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.1□□□□□ -0.47
PRKDCP78527 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.1□□□□□ -0.47
PRKDCP78527 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.09□□□□□ -0.47
PRKDCP78527 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PRKDCP78527 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
PRKDCP78527 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PRKDCP78527 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
PRKDCP78527 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.09□□□□□ -0.47
PRKDCP78527 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PRKDCP78527 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.09□□□□□ -0.47
PRKDCP78527 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.09□□□□□ -0.47
PRKDCP78527 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
PRKDCP78527 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.09□□□□□ -0.47
PRKDCP78527 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.09□□□□□ -0.47
PRKDCP78527 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.09□□□□□ -0.47
PRKDCP78527 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PRKDCP78527 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
PRKDCP78527 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
PRKDCP78527 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PRKDCP78527 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.09□□□□□ -0.47
PRKDCP78527 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.09□□□□□ -0.47
PRKDCP78527 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PRKDCP78527 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms