Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
APOC4P55056 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC4P55056 AC093525.9-201ENST00000624961 1746 ntBASIC12.48□□□□□ -0.41
APOC4P55056 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC4P55056 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 AC025580.3-201ENST00000617932 1424 ntBASIC12.48□□□□□ -0.41
APOC4P55056 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 AL021920.2-201ENST00000624828 1351 ntBASIC12.48□□□□□ -0.41
APOC4P55056 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
APOC4P55056 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
APOC4P55056 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.48□□□□□ -0.41
APOC4P55056 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.48□□□□□ -0.41
APOC4P55056 AC211486.1-202ENST00000416371 468 ntBASIC12.48□□□□□ -0.41
APOC4P55056 AC004967.1-201ENST00000453589 447 ntBASIC12.48□□□□□ -0.41
APOC4P55056 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.48□□□□□ -0.41
APOC4P55056 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.48□□□□□ -0.41
APOC4P55056 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC4P55056 AC211476.1-201ENST00000503899 468 ntBASIC12.48□□□□□ -0.41
APOC4P55056 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.48□□□□□ -0.41
APOC4P55056 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.48□□□□□ -0.41
APOC4P55056 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC4P55056 OR7E47P-204ENST00000575924 449 ntBASIC12.48□□□□□ -0.41
APOC4P55056 AC005412.3-201ENST00000580309 715 ntBASIC12.48□□□□□ -0.41
APOC4P55056 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.48□□□□□ -0.41
APOC4P55056 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.48□□□□□ -0.41
APOC4P55056 AL645728.2-201ENST00000641974 660 ntBASIC12.48□□□□□ -0.41
APOC4P55056 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC12.48□□□□□ -0.41
APOC4P55056 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
APOC4P55056 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC4P55056 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.48□□□□□ -0.41
APOC4P55056 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC4P55056 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC4P55056 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC4P55056 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
APOC4P55056 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC4P55056 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC4P55056 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC4P55056 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
APOC4P55056 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
APOC4P55056 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC4P55056 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
APOC4P55056 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
APOC4P55056 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
APOC4P55056 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
APOC4P55056 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.47□□□□□ -0.41
APOC4P55056 ACTG1P14-201ENST00000446382 1122 ntBASIC12.47□□□□□ -0.41
APOC4P55056 AC112482.1-201ENST00000492080 688 ntBASIC12.47□□□□□ -0.41
APOC4P55056 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.47□□□□□ -0.41
APOC4P55056 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
APOC4P55056 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.47□□□□□ -0.41
APOC4P55056 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.47□□□□□ -0.41
APOC4P55056 AC068137.2-201ENST00000605408 478 ntBASIC12.47□□□□□ -0.41
APOC4P55056 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.47□□□□□ -0.41
APOC4P55056 AL513190.1-201ENST00000621254 727 ntBASIC12.47□□□□□ -0.41
APOC4P55056 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.47□□□□□ -0.41
APOC4P55056 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
APOC4P55056 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
APOC4P55056 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.47□□□□□ -0.41
APOC4P55056 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
APOC4P55056 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
APOC4P55056 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC4P55056 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.47□□□□□ -0.41
APOC4P55056 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC4P55056 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms