Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ACLYP53396 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ACLYP53396 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
ACLYP53396 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.62■□□□□ 0.57
ACLYP53396 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ACLYP53396 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.62■□□□□ 0.57
ACLYP53396 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.62■□□□□ 0.57
ACLYP53396 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.62■□□□□ 0.57
ACLYP53396 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.62■□□□□ 0.57
ACLYP53396 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACLYP53396 AC133963.1-201ENST00000504166 1679 ntBASIC18.62■□□□□ 0.57
ACLYP53396 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.62■□□□□ 0.57
ACLYP53396 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACLYP53396 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ACLYP53396 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ACLYP53396 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACLYP53396 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.61■□□□□ 0.57
ACLYP53396 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ACLYP53396 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
ACLYP53396 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.61■□□□□ 0.57
ACLYP53396 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.61■□□□□ 0.57
ACLYP53396 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.61■□□□□ 0.57
ACLYP53396 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.61■□□□□ 0.57
ACLYP53396 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
ACLYP53396 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.61■□□□□ 0.57
ACLYP53396 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 CU639417.3-201ENST00000624240 1404 ntBASIC18.61■□□□□ 0.57
ACLYP53396 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.61■□□□□ 0.57
ACLYP53396 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ACLYP53396 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.61■□□□□ 0.57
ACLYP53396 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.61■□□□□ 0.57
ACLYP53396 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.61■□□□□ 0.57
ACLYP53396 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 MIR6752-201ENST00000618442 71 ntBASIC18.61■□□□□ 0.57
ACLYP53396 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ACLYP53396 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ACLYP53396 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.61■□□□□ 0.57
ACLYP53396 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.61■□□□□ 0.57
ACLYP53396 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.61■□□□□ 0.57
ACLYP53396 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.61■□□□□ 0.57
ACLYP53396 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ACLYP53396 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ACLYP53396 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.6■□□□□ 0.57
ACLYP53396 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ACLYP53396 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ACLYP53396 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ACLYP53396 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ACLYP53396 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ACLYP53396 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ACLYP53396 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.6■□□□□ 0.57
ACLYP53396 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ACLYP53396 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ACLYP53396 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.6■□□□□ 0.57
ACLYP53396 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.6■□□□□ 0.57
ACLYP53396 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ACLYP53396 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ACLYP53396 KRT17P7-201ENST00000451704 1104 ntBASIC18.6■□□□□ 0.57
ACLYP53396 AC009477.1-201ENST00000452936 217 ntBASIC18.6■□□□□ 0.57
ACLYP53396 KRT18P34-201ENST00000488218 1270 ntBASIC18.6■□□□□ 0.57
ACLYP53396 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.6■□□□□ 0.57
ACLYP53396 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.6■□□□□ 0.57
ACLYP53396 CYP2A7P1-201ENST00000595391 815 ntBASIC18.6■□□□□ 0.57
ACLYP53396 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
ACLYP53396 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ACLYP53396 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ACLYP53396 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ACLYP53396 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.6■□□□□ 0.57
ACLYP53396 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ACLYP53396 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.6■□□□□ 0.57
ACLYP53396 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ACLYP53396 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ACLYP53396 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ACLYP53396 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ACLYP53396 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.6■□□□□ 0.57
ACLYP53396 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.6■□□□□ 0.57
ACLYP53396 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ACLYP53396 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ACLYP53396 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ACLYP53396 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ACLYP53396 LINC00895-201ENST00000629028 1637 ntBASIC18.6■□□□□ 0.57
ACLYP53396 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ACLYP53396 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACLYP53396 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACLYP53396 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACLYP53396 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACLYP53396 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms