Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL513480.1-201ENST00000451731 511 ntBASIC19.21■□□□□ 0.67
USP11P51784 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.21■□□□□ 0.67
USP11P51784 AC018845.2-201ENST00000568326 409 ntBASIC19.21■□□□□ 0.67
USP11P51784 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
USP11P51784 MIR4515-201ENST00000584082 81 ntBASIC19.21■□□□□ 0.67
USP11P51784 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.21■□□□□ 0.67
USP11P51784 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
USP11P51784 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.21■□□□□ 0.67
USP11P51784 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.21■□□□□ 0.67
USP11P51784 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
USP11P51784 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
USP11P51784 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USP11P51784 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
USP11P51784 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.2■□□□□ 0.66
USP11P51784 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.2■□□□□ 0.66
USP11P51784 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.2■□□□□ 0.66
USP11P51784 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.2■□□□□ 0.66
USP11P51784 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.2■□□□□ 0.66
USP11P51784 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.2■□□□□ 0.66
USP11P51784 MIR4492-201ENST00000581627 80 ntBASIC19.2■□□□□ 0.66
USP11P51784 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.2■□□□□ 0.66
USP11P51784 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.2■□□□□ 0.66
USP11P51784 AL645728.2-201ENST00000641974 660 ntBASIC19.2■□□□□ 0.66
USP11P51784 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USP11P51784 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.2■□□□□ 0.66
USP11P51784 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
USP11P51784 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.2■□□□□ 0.66
USP11P51784 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.2■□□□□ 0.66
USP11P51784 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP11P51784 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.2■□□□□ 0.66
USP11P51784 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
USP11P51784 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
USP11P51784 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP11P51784 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP11P51784 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP11P51784 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP11P51784 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP11P51784 PCDHB17P-201ENST00000539533 2393 ntBASIC19.19■□□□□ 0.66
USP11P51784 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.19■□□□□ 0.66
USP11P51784 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
USP11P51784 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
USP11P51784 HCG4-201ENST00000418983 998 ntBASIC19.19■□□□□ 0.66
USP11P51784 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.19■□□□□ 0.66
USP11P51784 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.19■□□□□ 0.66
USP11P51784 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.19■□□□□ 0.66
USP11P51784 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.19■□□□□ 0.66
USP11P51784 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.19■□□□□ 0.66
USP11P51784 KRT19P2-202ENST00000557173 1012 ntBASIC19.19■□□□□ 0.66
USP11P51784 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.19■□□□□ 0.66
USP11P51784 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP11P51784 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP11P51784 SLC22A20-204ENST00000530038 1673 ntBASIC19.19■□□□□ 0.66
USP11P51784 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
USP11P51784 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.19■□□□□ 0.66
USP11P51784 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP11P51784 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.19■□□□□ 0.66
USP11P51784 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.19■□□□□ 0.66
USP11P51784 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP11P51784 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP11P51784 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP11P51784 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP11P51784 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP11P51784 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.19■□□□□ 0.66
USP11P51784 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP11P51784 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.18■□□□□ 0.66
USP11P51784 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP11P51784 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
USP11P51784 AC025580.3-201ENST00000617932 1424 ntBASIC19.18■□□□□ 0.66
USP11P51784 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
USP11P51784 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP11P51784 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP11P51784 AC131009.4-201ENST00000624048 1740 ntBASIC19.18■□□□□ 0.66
USP11P51784 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP11P51784 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.18■□□□□ 0.66
USP11P51784 AP002490.2-201ENST00000524791 560 ntBASIC19.18■□□□□ 0.66
USP11P51784 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms