Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARCN1P48444 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ARCN1P48444 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
ARCN1P48444 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARCN1P48444 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ARCN1P48444 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARCN1P48444 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARCN1P48444 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARCN1P48444 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARCN1P48444 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.09■□□□□ 0.33
ARCN1P48444 AC079776.4-201ENST00000511039 504 ntBASIC17.09■□□□□ 0.33
ARCN1P48444 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.09■□□□□ 0.33
ARCN1P48444 AL355877.3-201ENST00000622820 899 ntBASIC17.09■□□□□ 0.33
ARCN1P48444 AL139288.1-201ENST00000623748 933 ntBASIC17.09■□□□□ 0.33
ARCN1P48444 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
ARCN1P48444 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARCN1P48444 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.09■□□□□ 0.33
ARCN1P48444 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARCN1P48444 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ARCN1P48444 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARCN1P48444 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARCN1P48444 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARCN1P48444 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARCN1P48444 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ARCN1P48444 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARCN1P48444 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.08■□□□□ 0.33
ARCN1P48444 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARCN1P48444 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARCN1P48444 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ARCN1P48444 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ARCN1P48444 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARCN1P48444 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.08■□□□□ 0.33
ARCN1P48444 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.08■□□□□ 0.33
ARCN1P48444 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARCN1P48444 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARCN1P48444 TUBB8P12-201ENST00000308911 1335 ntBASIC17.08■□□□□ 0.32
ARCN1P48444 TUBB7P-202ENST00000428444 1305 ntBASIC17.08■□□□□ 0.32
ARCN1P48444 TUBB8P7-204ENST00000567960 1332 ntBASIC17.08■□□□□ 0.32
ARCN1P48444 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARCN1P48444 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARCN1P48444 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ARCN1P48444 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.08■□□□□ 0.32
ARCN1P48444 FDX1P1-201ENST00000449115 551 ntBASIC17.08■□□□□ 0.32
ARCN1P48444 FAM197Y8-203ENST00000450145 560 ntBASIC17.08■□□□□ 0.32
ARCN1P48444 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
ARCN1P48444 FGFR3P6-201ENST00000457012 610 ntBASIC17.08■□□□□ 0.32
ARCN1P48444 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARCN1P48444 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARCN1P48444 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.08■□□□□ 0.32
ARCN1P48444 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.08■□□□□ 0.32
ARCN1P48444 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.08■□□□□ 0.32
ARCN1P48444 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ARCN1P48444 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
ARCN1P48444 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
ARCN1P48444 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARCN1P48444 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARCN1P48444 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARCN1P48444 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.08■□□□□ 0.32
ARCN1P48444 OR6D1P-202ENST00000641007 5290 ntBASIC17.08■□□□□ 0.32
ARCN1P48444 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARCN1P48444 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARCN1P48444 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.08■□□□□ 0.32
ARCN1P48444 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ARCN1P48444 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARCN1P48444 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.07■□□□□ 0.32
ARCN1P48444 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ARCN1P48444 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARCN1P48444 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARCN1P48444 NCF1C-201ENST00000438382 1427 ntBASIC17.07■□□□□ 0.32
ARCN1P48444 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.07■□□□□ 0.32
ARCN1P48444 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.07■□□□□ 0.32
ARCN1P48444 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.07■□□□□ 0.32
ARCN1P48444 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ARCN1P48444 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.07■□□□□ 0.32
ARCN1P48444 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
ARCN1P48444 SART3-203ENST00000546611 1184 ntBASIC17.07■□□□□ 0.32
ARCN1P48444 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.07■□□□□ 0.32
ARCN1P48444 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.07■□□□□ 0.32
ARCN1P48444 AC148477.8-201ENST00000624298 468 ntBASIC17.07■□□□□ 0.32
ARCN1P48444 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ARCN1P48444 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.07■□□□□ 0.32
ARCN1P48444 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARCN1P48444 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ARCN1P48444 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
ARCN1P48444 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARCN1P48444 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARCN1P48444 UBALD1-205ENST00000590891 2641 ntBASIC17.07■□□□□ 0.32
ARCN1P48444 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARCN1P48444 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
ARCN1P48444 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARCN1P48444 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARCN1P48444 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.07■□□□□ 0.32
ARCN1P48444 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARCN1P48444 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARCN1P48444 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.06■□□□□ 0.32
ARCN1P48444 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARCN1P48444 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
ARCN1P48444 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARCN1P48444 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ARCN1P48444 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms