Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SSR1P43307 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.2■□□□□ 0.5
SSR1P43307 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SSR1P43307 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.2■□□□□ 0.5
SSR1P43307 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SSR1P43307 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SSR1P43307 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.19■□□□□ 0.5
SSR1P43307 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR1P43307 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.19■□□□□ 0.5
SSR1P43307 AC092053.1-201ENST00000605787 1936 ntBASIC18.19■□□□□ 0.5
SSR1P43307 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.19■□□□□ 0.5
SSR1P43307 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.19■□□□□ 0.5
SSR1P43307 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SSR1P43307 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR1P43307 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SSR1P43307 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR1P43307 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SSR1P43307 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SSR1P43307 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SSR1P43307 KLF4P1-201ENST00000412782 1185 ntBASIC18.19■□□□□ 0.5
SSR1P43307 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SSR1P43307 AC104819.1-201ENST00000504587 486 ntBASIC18.19■□□□□ 0.5
SSR1P43307 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.19■□□□□ 0.5
SSR1P43307 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.19■□□□□ 0.5
SSR1P43307 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SSR1P43307 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.19■□□□□ 0.5
SSR1P43307 AC069148.1-201ENST00000608741 768 ntBASIC18.19■□□□□ 0.5
SSR1P43307 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SSR1P43307 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SSR1P43307 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR1P43307 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SSR1P43307 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SSR1P43307 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.19■□□□□ 0.5
SSR1P43307 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR1P43307 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR1P43307 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR1P43307 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SSR1P43307 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SSR1P43307 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.18■□□□□ 0.5
SSR1P43307 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.18■□□□□ 0.5
SSR1P43307 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.18■□□□□ 0.5
SSR1P43307 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.18■□□□□ 0.5
SSR1P43307 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SSR1P43307 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.18■□□□□ 0.5
SSR1P43307 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.18■□□□□ 0.5
SSR1P43307 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.18■□□□□ 0.5
SSR1P43307 AC092119.3-201ENST00000612618 583 ntBASIC18.18■□□□□ 0.5
SSR1P43307 AC093458.2-201ENST00000623150 629 ntBASIC18.18■□□□□ 0.5
SSR1P43307 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SSR1P43307 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SSR1P43307 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SSR1P43307 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.18■□□□□ 0.5
SSR1P43307 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SSR1P43307 AC063926.3-201ENST00000624734 5658 ntBASIC18.18■□□□□ 0.5
SSR1P43307 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 AC005915.1-201ENST00000624912 2018 ntBASIC18.18■□□□□ 0.5
SSR1P43307 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SSR1P43307 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.18■□□□□ 0.5
SSR1P43307 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SSR1P43307 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.18■□□□□ 0.5
SSR1P43307 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SSR1P43307 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SSR1P43307 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSR1P43307 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR1P43307 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR1P43307 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SSR1P43307 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.17■□□□□ 0.5
SSR1P43307 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.17■□□□□ 0.5
SSR1P43307 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.17■□□□□ 0.5
SSR1P43307 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SSR1P43307 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.17■□□□□ 0.5
SSR1P43307 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR1P43307 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR1P43307 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR1P43307 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR1P43307 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR1P43307 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.17■□□□□ 0.5
SSR1P43307 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.17■□□□□ 0.5
SSR1P43307 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.17■□□□□ 0.5
SSR1P43307 RCN1P2-201ENST00000398357 915 ntBASIC18.17■□□□□ 0.5
SSR1P43307 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.17■□□□□ 0.5
SSR1P43307 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms