Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
GDNFP39905 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
GDNFP39905 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GDNFP39905 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.91□□□□□ -0.02
GDNFP39905 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.91□□□□□ -0.02
GDNFP39905 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.91□□□□□ -0.02
GDNFP39905 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDNFP39905 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDNFP39905 HOMER2P1-201ENST00000455653 964 ntBASIC14.91□□□□□ -0.02
GDNFP39905 AC092647.4-201ENST00000457211 535 ntBASIC14.91□□□□□ -0.02
GDNFP39905 VENTXP5-201ENST00000523979 775 ntBASIC14.91□□□□□ -0.02
GDNFP39905 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.91□□□□□ -0.02
GDNFP39905 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.91□□□□□ -0.02
GDNFP39905 AC024563.2-201ENST00000603282 481 ntBASIC14.91□□□□□ -0.02
GDNFP39905 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GDNFP39905 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.91□□□□□ -0.02
GDNFP39905 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
GDNFP39905 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDNFP39905 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.91□□□□□ -0.02
GDNFP39905 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
GDNFP39905 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDNFP39905 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.91□□□□□ -0.02
GDNFP39905 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GDNFP39905 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDNFP39905 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDNFP39905 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDNFP39905 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GDNFP39905 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDNFP39905 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GDNFP39905 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 AC005052.1-201ENST00000625181 2492 ntBASIC14.9□□□□□ -0.02
GDNFP39905 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.9□□□□□ -0.02
GDNFP39905 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.9□□□□□ -0.02
GDNFP39905 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.9□□□□□ -0.02
GDNFP39905 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
GDNFP39905 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 HBZP1-201ENST00000354915 429 ntBASIC14.9□□□□□ -0.02
GDNFP39905 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.9□□□□□ -0.02
GDNFP39905 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.9□□□□□ -0.02
GDNFP39905 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.9□□□□□ -0.02
GDNFP39905 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 SPDYE13P-201ENST00000445314 798 ntBASIC14.9□□□□□ -0.02
GDNFP39905 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.9□□□□□ -0.02
GDNFP39905 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.9□□□□□ -0.02
GDNFP39905 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.9□□□□□ -0.02
GDNFP39905 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
GDNFP39905 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
GDNFP39905 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
GDNFP39905 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.9□□□□□ -0.02
GDNFP39905 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 PKD1P5-201ENST00000532415 10291 ntBASIC14.9□□□□□ -0.02
GDNFP39905 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.9□□□□□ -0.02
GDNFP39905 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.9□□□□□ -0.02
GDNFP39905 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
GDNFP39905 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDNFP39905 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.89□□□□□ -0.03
GDNFP39905 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.89□□□□□ -0.03
GDNFP39905 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 NFIC-211ENST00000641145 8399 ntBASIC14.89□□□□□ -0.03
GDNFP39905 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.89□□□□□ -0.03
GDNFP39905 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.89□□□□□ -0.03
GDNFP39905 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.89□□□□□ -0.03
GDNFP39905 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.89□□□□□ -0.03
GDNFP39905 FAM8A6P-201ENST00000407496 1135 ntBASIC14.89□□□□□ -0.03
GDNFP39905 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.89□□□□□ -0.03
GDNFP39905 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.89□□□□□ -0.03
GDNFP39905 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.89□□□□□ -0.03
GDNFP39905 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms