Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PTPN7P35236 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PTPN7P35236 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN7P35236 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PTPN7P35236 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN7P35236 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN7P35236 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN7P35236 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN7P35236 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN7P35236 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN7P35236 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN7P35236 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
PTPN7P35236 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN7P35236 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN7P35236 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN7P35236 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN7P35236 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN7P35236 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN7P35236 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN7P35236 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN7P35236 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN7P35236 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN7P35236 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PTPN7P35236 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN7P35236 AC138894.3-201ENST00000603787 634 ntBASIC17.62■□□□□ 0.41
PTPN7P35236 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN7P35236 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PTPN7P35236 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN7P35236 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN7P35236 CYP2T1P-202ENST00000641596 2535 ntBASIC17.62■□□□□ 0.41
PTPN7P35236 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN7P35236 AC006449.5-201ENST00000610658 2098 ntBASIC17.62■□□□□ 0.41
PTPN7P35236 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN7P35236 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN7P35236 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PTPN7P35236 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN7P35236 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PTPN7P35236 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN7P35236 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN7P35236 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
PTPN7P35236 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PTPN7P35236 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
PTPN7P35236 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 BX005266.1-201ENST00000473402 457 ntBASIC17.61■□□□□ 0.41
PTPN7P35236 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPN7P35236 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN7P35236 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPN7P35236 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPN7P35236 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN7P35236 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPN7P35236 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.61■□□□□ 0.41
PTPN7P35236 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN7P35236 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PTPN7P35236 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PTPN7P35236 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
PTPN7P35236 AC006538.1-201ENST00000567905 1585 ntBASIC17.61■□□□□ 0.41
PTPN7P35236 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN7P35236 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN7P35236 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN7P35236 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PTPN7P35236 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
PTPN7P35236 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN7P35236 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
PTPN7P35236 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.6■□□□□ 0.41
PTPN7P35236 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN7P35236 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN7P35236 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN7P35236 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN7P35236 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PTPN7P35236 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPN7P35236 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN7P35236 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN7P35236 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPN7P35236 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PTPN7P35236 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.6■□□□□ 0.41
PTPN7P35236 NKAPP1-205ENST00000585790 367 ntBASIC17.6■□□□□ 0.41
PTPN7P35236 AL139424.1-201ENST00000607572 797 ntBASIC17.6■□□□□ 0.41
PTPN7P35236 AL589182.2-201ENST00000619332 1049 ntBASIC17.6■□□□□ 0.41
PTPN7P35236 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN7P35236 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PTPN7P35236 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN7P35236 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN7P35236 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN7P35236 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PTPN7P35236 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PTPN7P35236 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms