Protein–RNA interactions for Protein: P31268

HOXA7, Homeobox protein Hox-A7, humanhuman

Predicted RBP Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA7P31268 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
HOXA7P31268 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA7P31268 AC069262.1-201ENST00000539058 672 ntBASIC19.7■□□□□ 0.74
HOXA7P31268 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.7■□□□□ 0.74
HOXA7P31268 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA7P31268 AC084121.4-201ENST00000641598 221 ntBASIC19.7■□□□□ 0.74
HOXA7P31268 AF228730.8-201ENST00000642140 221 ntBASIC19.7■□□□□ 0.74
HOXA7P31268 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA7P31268 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
HOXA7P31268 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
HOXA7P31268 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA7P31268 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.7■□□□□ 0.74
HOXA7P31268 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
HOXA7P31268 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA7P31268 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 AC016396.2-201ENST00000562575 1417 ntBASIC19.69■□□□□ 0.74
HOXA7P31268 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HOXA7P31268 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA7P31268 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA7P31268 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HOXA7P31268 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HOXA7P31268 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 KRT18P32-201ENST00000424695 1287 ntBASIC19.69■□□□□ 0.74
HOXA7P31268 SPCS2P4-201ENST00000436160 681 ntBASIC19.69■□□□□ 0.74
HOXA7P31268 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXA7P31268 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.69■□□□□ 0.74
HOXA7P31268 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.69■□□□□ 0.74
HOXA7P31268 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA7P31268 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.69■□□□□ 0.74
HOXA7P31268 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXA7P31268 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXA7P31268 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA7P31268 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXA7P31268 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HOXA7P31268 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA7P31268 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA7P31268 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA7P31268 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HOXA7P31268 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA7P31268 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HOXA7P31268 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA7P31268 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXA7P31268 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA7P31268 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA7P31268 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA7P31268 AC055876.3-201ENST00000431496 288 ntBASIC19.68■□□□□ 0.74
HOXA7P31268 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA7P31268 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXA7P31268 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA7P31268 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.68■□□□□ 0.74
HOXA7P31268 AL009183.1-201ENST00000603760 355 ntBASIC19.68■□□□□ 0.74
HOXA7P31268 AC138649.4-201ENST00000612222 287 ntBASIC19.68■□□□□ 0.74
HOXA7P31268 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA7P31268 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA7P31268 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HOXA7P31268 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA7P31268 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA7P31268 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA7P31268 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA7P31268 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA7P31268 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXA7P31268 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HOXA7P31268 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA7P31268 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
HOXA7P31268 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA7P31268 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HOXA7P31268 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA7P31268 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
HOXA7P31268 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA7P31268 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA7P31268 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA7P31268 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.67■□□□□ 0.74
HOXA7P31268 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.67■□□□□ 0.74
HOXA7P31268 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.67■□□□□ 0.74
HOXA7P31268 AC109635.5-201ENST00000533593 962 ntBASIC19.67■□□□□ 0.74
HOXA7P31268 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA7P31268 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA7P31268 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA7P31268 KRT8P23-201ENST00000560090 1207 ntBASIC19.67■□□□□ 0.74
HOXA7P31268 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA7P31268 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA7P31268 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA7P31268 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA7P31268 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA7P31268 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA7P31268 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HOXA7P31268 TUBB3P1-201ENST00000405796 1332 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms