Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH1P12830 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH1P12830 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH1P12830 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH1P12830 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH1P12830 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH1P12830 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH1P12830 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH1P12830 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH1P12830 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH1P12830 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH1P12830 AL513477.1-201ENST00000602865 2407 ntBASIC16.66■□□□□ 0.26
CDH1P12830 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CDH1P12830 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH1P12830 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH1P12830 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH1P12830 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH1P12830 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CDH1P12830 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDH1P12830 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.65■□□□□ 0.26
CDH1P12830 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CDH1P12830 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDH1P12830 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH1P12830 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.65■□□□□ 0.26
CDH1P12830 LINC00982-205ENST00000420957 435 ntBASIC16.65■□□□□ 0.26
CDH1P12830 PRYP5-201ENST00000451909 266 ntBASIC16.65■□□□□ 0.26
CDH1P12830 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH1P12830 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH1P12830 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.65■□□□□ 0.26
CDH1P12830 MTDHP4-201ENST00000600287 670 ntBASIC16.65■□□□□ 0.26
CDH1P12830 AL691432.3-201ENST00000621860 400 ntBASIC16.65■□□□□ 0.26
CDH1P12830 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDH1P12830 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH1P12830 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH1P12830 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH1P12830 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH1P12830 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH1P12830 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDH1P12830 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH1P12830 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDH1P12830 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDH1P12830 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDH1P12830 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CDH1P12830 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH1P12830 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH1P12830 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH1P12830 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDH1P12830 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH1P12830 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH1P12830 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH1P12830 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH1P12830 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CDH1P12830 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH1P12830 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH1P12830 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH1P12830 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH1P12830 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH1P12830 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH1P12830 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH1P12830 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CDH1P12830 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH1P12830 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH1P12830 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH1P12830 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH1P12830 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH1P12830 AC004870.1-201ENST00000315132 882 ntBASIC16.64■□□□□ 0.25
CDH1P12830 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH1P12830 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH1P12830 ACTG1P4-201ENST00000425123 1122 ntBASIC16.64■□□□□ 0.25
CDH1P12830 AC079781.3-201ENST00000449110 356 ntBASIC16.64■□□□□ 0.25
CDH1P12830 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.64■□□□□ 0.25
CDH1P12830 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
CDH1P12830 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH1P12830 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CDH1P12830 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH1P12830 AL121912.1-201ENST00000603683 238 ntBASIC16.64■□□□□ 0.25
CDH1P12830 AC064862.7-201ENST00000604520 867 ntBASIC16.64■□□□□ 0.25
CDH1P12830 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH1P12830 TP73-AS1-207ENST00000624167 988 ntBASIC16.64■□□□□ 0.25
CDH1P12830 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDH1P12830 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms