Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SP9P0CG40 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SP9P0CG40 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SP9P0CG40 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SP9P0CG40 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SP9P0CG40 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SP9P0CG40 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SP9P0CG40 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SP9P0CG40 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SP9P0CG40 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SP9P0CG40 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SP9P0CG40 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.58■□□□□ 0.25
SP9P0CG40 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SP9P0CG40 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.58■□□□□ 0.25
SP9P0CG40 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SP9P0CG40 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
SP9P0CG40 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.58■□□□□ 0.24
SP9P0CG40 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.58■□□□□ 0.24
SP9P0CG40 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SP9P0CG40 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SP9P0CG40 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.58■□□□□ 0.24
SP9P0CG40 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SP9P0CG40 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SP9P0CG40 AC114501.2-201ENST00000439631 535 ntBASIC16.58■□□□□ 0.24
SP9P0CG40 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SP9P0CG40 AC104989.1-201ENST00000519711 778 ntBASIC16.58■□□□□ 0.24
SP9P0CG40 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.58■□□□□ 0.24
SP9P0CG40 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SP9P0CG40 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
SP9P0CG40 AL512361.1-201ENST00000554200 418 ntBASIC16.58■□□□□ 0.24
SP9P0CG40 RN7SL219P-201ENST00000582872 296 ntBASIC16.58■□□□□ 0.24
SP9P0CG40 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SP9P0CG40 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
SP9P0CG40 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.58■□□□□ 0.24
SP9P0CG40 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SP9P0CG40 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.58■□□□□ 0.24
SP9P0CG40 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.58■□□□□ 0.24
SP9P0CG40 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.58■□□□□ 0.24
SP9P0CG40 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SP9P0CG40 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.58■□□□□ 0.24
SP9P0CG40 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SP9P0CG40 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.58■□□□□ 0.24
SP9P0CG40 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SP9P0CG40 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SP9P0CG40 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SP9P0CG40 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.57■□□□□ 0.24
SP9P0CG40 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.57■□□□□ 0.24
SP9P0CG40 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SP9P0CG40 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.57■□□□□ 0.24
SP9P0CG40 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.57■□□□□ 0.24
SP9P0CG40 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.57■□□□□ 0.24
SP9P0CG40 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SP9P0CG40 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
SP9P0CG40 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.57■□□□□ 0.24
SP9P0CG40 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.57■□□□□ 0.24
SP9P0CG40 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.57■□□□□ 0.24
SP9P0CG40 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.57■□□□□ 0.24
SP9P0CG40 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.57■□□□□ 0.24
SP9P0CG40 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.57■□□□□ 0.24
SP9P0CG40 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.57■□□□□ 0.24
SP9P0CG40 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.57■□□□□ 0.24
SP9P0CG40 SRD5A3P1-201ENST00000603021 949 ntBASIC16.57■□□□□ 0.24
SP9P0CG40 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.57■□□□□ 0.24
SP9P0CG40 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.57■□□□□ 0.24
SP9P0CG40 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.57■□□□□ 0.24
SP9P0CG40 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.57■□□□□ 0.24
SP9P0CG40 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.57■□□□□ 0.24
SP9P0CG40 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SP9P0CG40 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SP9P0CG40 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.56■□□□□ 0.24
SP9P0CG40 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SP9P0CG40 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SP9P0CG40 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.56■□□□□ 0.24
SP9P0CG40 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SP9P0CG40 FLJ13224-201ENST00000313737 1514 ntBASIC16.56■□□□□ 0.24
SP9P0CG40 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SP9P0CG40 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.56■□□□□ 0.24
SP9P0CG40 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SP9P0CG40 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
SP9P0CG40 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SP9P0CG40 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SP9P0CG40 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.56■□□□□ 0.24
SP9P0CG40 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.56■□□□□ 0.24
SP9P0CG40 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.56■□□□□ 0.24
SP9P0CG40 BOLA2P3-201ENST00000404566 256 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms