Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC172P0C7W6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 AL020989.1-201ENST00000422979 469 ntBASIC18.49■□□□□ 0.55
CCDC172P0C7W6 IGHV3-47-201ENST00000425060 335 ntBASIC18.49■□□□□ 0.55
CCDC172P0C7W6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 AC104819.1-201ENST00000504587 486 ntBASIC18.49■□□□□ 0.55
CCDC172P0C7W6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 BNIP3P18-201ENST00000593976 575 ntBASIC18.49■□□□□ 0.55
CCDC172P0C7W6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 LINC00554-201ENST00000564841 3011 ntBASIC18.49■□□□□ 0.55
CCDC172P0C7W6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC172P0C7W6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 RCN1P2-201ENST00000398357 915 ntBASIC18.48■□□□□ 0.55
CCDC172P0C7W6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 AP002490.2-201ENST00000524791 560 ntBASIC18.48■□□□□ 0.55
CCDC172P0C7W6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 AC092329.2-201ENST00000598402 547 ntBASIC18.48■□□□□ 0.55
CCDC172P0C7W6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC172P0C7W6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC172P0C7W6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC172P0C7W6 AGGF1P2-201ENST00000426656 2106 ntBASIC18.47■□□□□ 0.55
CCDC172P0C7W6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC172P0C7W6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC172P0C7W6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC172P0C7W6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC172P0C7W6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC172P0C7W6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC172P0C7W6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC172P0C7W6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC172P0C7W6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC172P0C7W6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC172P0C7W6 PCDH8P1-201ENST00000428983 2773 ntBASIC18.47■□□□□ 0.55
CCDC172P0C7W6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC172P0C7W6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC172P0C7W6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CCDC172P0C7W6 ACTG1P4-201ENST00000425123 1122 ntBASIC18.47■□□□□ 0.55
CCDC172P0C7W6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms