Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TOMM40O96008 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.42□□□□□ -0.26
TOMM40O96008 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TOMM40O96008 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.42□□□□□ -0.26
TOMM40O96008 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TOMM40O96008 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.42□□□□□ -0.26
TOMM40O96008 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TOMM40O96008 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TOMM40O96008 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.42□□□□□ -0.26
TOMM40O96008 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TOMM40O96008 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TOMM40O96008 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TOMM40O96008 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TOMM40O96008 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.41□□□□□ -0.26
TOMM40O96008 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.41□□□□□ -0.26
TOMM40O96008 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.41□□□□□ -0.26
TOMM40O96008 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.41□□□□□ -0.26
TOMM40O96008 TMPOP1-202ENST00000424642 1267 ntBASIC13.41□□□□□ -0.26
TOMM40O96008 BX276092.5-203ENST00000456199 560 ntBASIC13.41□□□□□ -0.26
TOMM40O96008 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.41□□□□□ -0.26
TOMM40O96008 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.41□□□□□ -0.26
TOMM40O96008 AL121956.5-201ENST00000625261 221 ntBASIC13.41□□□□□ -0.26
TOMM40O96008 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.41□□□□□ -0.26
TOMM40O96008 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TOMM40O96008 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.41□□□□□ -0.26
TOMM40O96008 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.41□□□□□ -0.26
TOMM40O96008 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 AL603756.1-201ENST00000606511 2163 ntBASIC13.41□□□□□ -0.26
TOMM40O96008 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TOMM40O96008 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TOMM40O96008 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.4□□□□□ -0.26
TOMM40O96008 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TOMM40O96008 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.4□□□□□ -0.26
TOMM40O96008 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.4□□□□□ -0.26
TOMM40O96008 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.4□□□□□ -0.26
TOMM40O96008 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.4□□□□□ -0.26
TOMM40O96008 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.4□□□□□ -0.26
TOMM40O96008 KLF4P1-201ENST00000412782 1185 ntBASIC13.4□□□□□ -0.26
TOMM40O96008 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.4□□□□□ -0.26
TOMM40O96008 CHCHD2P8-201ENST00000429873 447 ntBASIC13.4□□□□□ -0.26
TOMM40O96008 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.4□□□□□ -0.26
TOMM40O96008 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TOMM40O96008 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.4□□□□□ -0.26
TOMM40O96008 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.4□□□□□ -0.26
TOMM40O96008 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.4□□□□□ -0.26
TOMM40O96008 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.4□□□□□ -0.26
TOMM40O96008 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.4□□□□□ -0.26
TOMM40O96008 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
TOMM40O96008 AC011467.2-201ENST00000598425 242 ntBASIC13.4□□□□□ -0.26
TOMM40O96008 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TOMM40O96008 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.4□□□□□ -0.26
TOMM40O96008 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.4□□□□□ -0.26
TOMM40O96008 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.4□□□□□ -0.26
TOMM40O96008 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
TOMM40O96008 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.4□□□□□ -0.26
TOMM40O96008 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TOMM40O96008 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 AL135999.2-201ENST00000622438 1686 ntBASIC13.4□□□□□ -0.26
TOMM40O96008 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms