Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MBD4O95243 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.28■□□□□ 0.84
MBD4O95243 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.28■□□□□ 0.84
MBD4O95243 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.28■□□□□ 0.84
MBD4O95243 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MBD4O95243 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.28■□□□□ 0.84
MBD4O95243 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.28■□□□□ 0.84
MBD4O95243 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.28■□□□□ 0.84
MBD4O95243 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
MBD4O95243 MIR3687-2-201ENST00000577708 61 ntBASIC20.28■□□□□ 0.84
MBD4O95243 MIR3687-1-201ENST00000614492 61 ntBASIC20.28■□□□□ 0.84
MBD4O95243 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.28■□□□□ 0.84
MBD4O95243 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MBD4O95243 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MBD4O95243 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
MBD4O95243 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
MBD4O95243 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MBD4O95243 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
MBD4O95243 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MBD4O95243 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MBD4O95243 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MBD4O95243 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MBD4O95243 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MBD4O95243 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MBD4O95243 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MBD4O95243 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
MBD4O95243 AL021920.2-201ENST00000624828 1351 ntBASIC20.27■□□□□ 0.84
MBD4O95243 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MBD4O95243 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.27■□□□□ 0.84
MBD4O95243 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.27■□□□□ 0.84
MBD4O95243 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MBD4O95243 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.27■□□□□ 0.84
MBD4O95243 AC068137.2-201ENST00000605408 478 ntBASIC20.27■□□□□ 0.84
MBD4O95243 C20orf181-201ENST00000623918 480 ntBASIC20.27■□□□□ 0.84
MBD4O95243 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MBD4O95243 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MBD4O95243 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
MBD4O95243 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
MBD4O95243 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
MBD4O95243 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MBD4O95243 AP001094.4-201ENST00000579008 2176 ntBASIC20.27■□□□□ 0.83
MBD4O95243 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.26■□□□□ 0.83
MBD4O95243 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MBD4O95243 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 AL353732.1-201ENST00000569618 1459 ntBASIC20.26■□□□□ 0.83
MBD4O95243 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
MBD4O95243 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
MBD4O95243 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.26■□□□□ 0.83
MBD4O95243 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.26■□□□□ 0.83
MBD4O95243 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.26■□□□□ 0.83
MBD4O95243 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
MBD4O95243 MIR4515-201ENST00000584082 81 ntBASIC20.26■□□□□ 0.83
MBD4O95243 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MBD4O95243 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.26■□□□□ 0.83
MBD4O95243 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.26■□□□□ 0.83
MBD4O95243 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MBD4O95243 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.25■□□□□ 0.83
MBD4O95243 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
MBD4O95243 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.25■□□□□ 0.83
MBD4O95243 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD4O95243 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD4O95243 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.25■□□□□ 0.83
MBD4O95243 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD4O95243 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.25■□□□□ 0.83
MBD4O95243 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.25■□□□□ 0.83
MBD4O95243 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MBD4O95243 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD4O95243 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
MBD4O95243 HMGA1P7-201ENST00000406908 502 ntBASIC20.25■□□□□ 0.83
MBD4O95243 FAM58CP-201ENST00000435741 640 ntBASIC20.25■□□□□ 0.83
MBD4O95243 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.25■□□□□ 0.83
MBD4O95243 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.25■□□□□ 0.83
MBD4O95243 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.25■□□□□ 0.83
MBD4O95243 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.25■□□□□ 0.83
MBD4O95243 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.25■□□□□ 0.83
MBD4O95243 AC091812.2-201ENST00000619081 385 ntBASIC20.25■□□□□ 0.83
MBD4O95243 AL645728.2-201ENST00000641974 660 ntBASIC20.25■□□□□ 0.83
MBD4O95243 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD4O95243 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.25■□□□□ 0.83
MBD4O95243 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
MBD4O95243 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD4O95243 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MBD4O95243 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MBD4O95243 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms