Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CDKL5O76039 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CDKL5O76039 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL5O76039 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.82■□□□□ 0.76
CDKL5O76039 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL5O76039 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL5O76039 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL5O76039 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL5O76039 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.82■□□□□ 0.76
CDKL5O76039 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.81■□□□□ 0.76
CDKL5O76039 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.81■□□□□ 0.76
CDKL5O76039 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL5O76039 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.81■□□□□ 0.76
CDKL5O76039 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.81■□□□□ 0.76
CDKL5O76039 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL5O76039 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.81■□□□□ 0.76
CDKL5O76039 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.81■□□□□ 0.76
CDKL5O76039 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.81■□□□□ 0.76
CDKL5O76039 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL5O76039 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.81■□□□□ 0.76
CDKL5O76039 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL5O76039 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL5O76039 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL5O76039 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CDKL5O76039 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL5O76039 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.81■□□□□ 0.76
CDKL5O76039 AL450487.1-201ENST00000426799 995 ntBASIC19.81■□□□□ 0.76
CDKL5O76039 PAWRP1-201ENST00000451083 565 ntBASIC19.81■□□□□ 0.76
CDKL5O76039 RNPS1P1-201ENST00000507437 918 ntBASIC19.81■□□□□ 0.76
CDKL5O76039 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.81■□□□□ 0.76
CDKL5O76039 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.81■□□□□ 0.76
CDKL5O76039 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.81■□□□□ 0.76
CDKL5O76039 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.81■□□□□ 0.76
CDKL5O76039 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL5O76039 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.81■□□□□ 0.76
CDKL5O76039 AL691432.3-201ENST00000621860 400 ntBASIC19.81■□□□□ 0.76
CDKL5O76039 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CDKL5O76039 PCDHB17P-201ENST00000539533 2393 ntBASIC19.81■□□□□ 0.76
CDKL5O76039 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.81■□□□□ 0.76
CDKL5O76039 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL5O76039 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL5O76039 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CDKL5O76039 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.8■□□□□ 0.76
CDKL5O76039 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDKL5O76039 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDKL5O76039 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.8■□□□□ 0.76
CDKL5O76039 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.8■□□□□ 0.76
CDKL5O76039 KRT8P49-201ENST00000604166 1432 ntBASIC19.8■□□□□ 0.76
CDKL5O76039 AC004870.1-201ENST00000315132 882 ntBASIC19.8■□□□□ 0.76
CDKL5O76039 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 PTCHD3P3-201ENST00000403073 906 ntBASIC19.8■□□□□ 0.76
CDKL5O76039 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 ELK2BP-201ENST00000415014 1224 ntBASIC19.8■□□□□ 0.76
CDKL5O76039 RPS2P1-201ENST00000434010 821 ntBASIC19.8■□□□□ 0.76
CDKL5O76039 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 FAAHP1-202ENST00000446499 1238 ntBASIC19.8■□□□□ 0.76
CDKL5O76039 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.8■□□□□ 0.76
CDKL5O76039 AF186996.4-201ENST00000467186 377 ntBASIC19.8■□□□□ 0.76
CDKL5O76039 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CDKL5O76039 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.8■□□□□ 0.76
CDKL5O76039 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.8■□□□□ 0.76
CDKL5O76039 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL5O76039 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDKL5O76039 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
CDKL5O76039 AGGF1P2-201ENST00000426656 2106 ntBASIC19.79■□□□□ 0.76
CDKL5O76039 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CDKL5O76039 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL5O76039 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL5O76039 AC006504.4-201ENST00000592118 1568 ntBASIC19.79■□□□□ 0.76
CDKL5O76039 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL5O76039 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.79■□□□□ 0.76
CDKL5O76039 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL5O76039 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL5O76039 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL5O76039 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.79■□□□□ 0.76
CDKL5O76039 FAM197Y8-203ENST00000450145 560 ntBASIC19.79■□□□□ 0.76
CDKL5O76039 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.79■□□□□ 0.76
CDKL5O76039 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.79■□□□□ 0.76
CDKL5O76039 RN7SL510P-201ENST00000581311 263 ntBASIC19.79■□□□□ 0.76
CDKL5O76039 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.79■□□□□ 0.76
CDKL5O76039 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL5O76039 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.79■□□□□ 0.76
CDKL5O76039 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDKL5O76039 TP73-AS1-207ENST00000624167 988 ntBASIC19.79■□□□□ 0.76
CDKL5O76039 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.79■□□□□ 0.76
CDKL5O76039 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
CDKL5O76039 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL5O76039 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms