Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
SCN2BO60939 AL590326.2-201ENST00000625139 305 ntBASIC16.2■□□□□ 0.18
SCN2BO60939 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.2■□□□□ 0.18
SCN2BO60939 IER3-202ENST00000376377 1350 ntBASIC16.2■□□□□ 0.18
SCN2BO60939 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN2BO60939 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SCN2BO60939 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCN2BO60939 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN2BO60939 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SCN2BO60939 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCN2BO60939 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCN2BO60939 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCN2BO60939 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN2BO60939 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.2■□□□□ 0.18
SCN2BO60939 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.2■□□□□ 0.18
SCN2BO60939 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN2BO60939 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.2■□□□□ 0.18
SCN2BO60939 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN2BO60939 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SCN2BO60939 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN2BO60939 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN2BO60939 SIGLEC16-201ENST00000599858 1437 ntBASIC16.19■□□□□ 0.18
SCN2BO60939 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCN2BO60939 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SCN2BO60939 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCN2BO60939 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SCN2BO60939 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
SCN2BO60939 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN2BO60939 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SCN2BO60939 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.19■□□□□ 0.18
SCN2BO60939 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCN2BO60939 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN2BO60939 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SCN2BO60939 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCN2BO60939 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN2BO60939 POM121L3P-201ENST00000419331 1163 ntBASIC16.19■□□□□ 0.18
SCN2BO60939 AL020989.1-201ENST00000422979 469 ntBASIC16.19■□□□□ 0.18
SCN2BO60939 SIGLEC30P-201ENST00000455569 941 ntBASIC16.19■□□□□ 0.18
SCN2BO60939 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.19■□□□□ 0.18
SCN2BO60939 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.19■□□□□ 0.18
SCN2BO60939 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.19■□□□□ 0.18
SCN2BO60939 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.19■□□□□ 0.18
SCN2BO60939 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
SCN2BO60939 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.19■□□□□ 0.18
SCN2BO60939 AC073592.4-201ENST00000623827 446 ntBASIC16.19■□□□□ 0.18
SCN2BO60939 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.19■□□□□ 0.18
SCN2BO60939 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN2BO60939 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SCN2BO60939 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SCN2BO60939 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN2BO60939 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
SCN2BO60939 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
SCN2BO60939 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.19■□□□□ 0.18
SCN2BO60939 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SCN2BO60939 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCN2BO60939 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.19■□□□□ 0.18
SCN2BO60939 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.18■□□□□ 0.18
SCN2BO60939 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.18■□□□□ 0.18
SCN2BO60939 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SCN2BO60939 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SCN2BO60939 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SCN2BO60939 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.18■□□□□ 0.18
SCN2BO60939 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.18■□□□□ 0.18
SCN2BO60939 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SCN2BO60939 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.18■□□□□ 0.18
SCN2BO60939 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SCN2BO60939 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.18■□□□□ 0.18
SCN2BO60939 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.18■□□□□ 0.18
SCN2BO60939 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.18■□□□□ 0.18
SCN2BO60939 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.18■□□□□ 0.18
SCN2BO60939 LINC00265-3P-201ENST00000447588 903 ntBASIC16.18■□□□□ 0.18
SCN2BO60939 AC092329.2-201ENST00000598402 547 ntBASIC16.18■□□□□ 0.18
SCN2BO60939 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.18■□□□□ 0.18
SCN2BO60939 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SCN2BO60939 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.18■□□□□ 0.18
SCN2BO60939 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.18■□□□□ 0.18
SCN2BO60939 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.18■□□□□ 0.18
SCN2BO60939 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.18■□□□□ 0.18
SCN2BO60939 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
SCN2BO60939 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SCN2BO60939 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.18■□□□□ 0.18
SCN2BO60939 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms