Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.83■□□□□ 0.77
CTNND1O60716 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CTNND1O60716 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNND1O60716 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CTNND1O60716 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CTNND1O60716 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNND1O60716 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.83■□□□□ 0.76
CTNND1O60716 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNND1O60716 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CTNND1O60716 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.83■□□□□ 0.76
CTNND1O60716 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNND1O60716 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.82■□□□□ 0.76
CTNND1O60716 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNND1O60716 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.82■□□□□ 0.76
CTNND1O60716 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CTNND1O60716 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTNND1O60716 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.82■□□□□ 0.76
CTNND1O60716 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.82■□□□□ 0.76
CTNND1O60716 AC135050.7-201ENST00000624508 2218 ntBASIC19.82■□□□□ 0.76
CTNND1O60716 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNND1O60716 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CTNND1O60716 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNND1O60716 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTNND1O60716 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.82■□□□□ 0.76
CTNND1O60716 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNND1O60716 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.82■□□□□ 0.76
CTNND1O60716 AC125807.1-201ENST00000483097 614 ntBASIC19.82■□□□□ 0.76
CTNND1O60716 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTNND1O60716 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.82■□□□□ 0.76
CTNND1O60716 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.82■□□□□ 0.76
CTNND1O60716 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.82■□□□□ 0.76
CTNND1O60716 FZD10-202ENST00000539839 3282 ntBASIC19.82■□□□□ 0.76
CTNND1O60716 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.82■□□□□ 0.76
CTNND1O60716 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CTNND1O60716 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.82■□□□□ 0.76
CTNND1O60716 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.82■□□□□ 0.76
CTNND1O60716 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.82■□□□□ 0.76
CTNND1O60716 AL133373.2-201ENST00000623187 2828 ntBASIC19.82■□□□□ 0.76
CTNND1O60716 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.82■□□□□ 0.76
CTNND1O60716 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNND1O60716 AC008677.1-201ENST00000519230 1561 ntBASIC19.82■□□□□ 0.76
CTNND1O60716 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNND1O60716 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.82■□□□□ 0.76
CTNND1O60716 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNND1O60716 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CTNND1O60716 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTNND1O60716 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.82■□□□□ 0.76
CTNND1O60716 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTNND1O60716 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.81■□□□□ 0.76
CTNND1O60716 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CTNND1O60716 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTNND1O60716 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTNND1O60716 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.81■□□□□ 0.76
CTNND1O60716 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTNND1O60716 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.81■□□□□ 0.76
CTNND1O60716 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.81■□□□□ 0.76
CTNND1O60716 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.81■□□□□ 0.76
CTNND1O60716 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTNND1O60716 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.81■□□□□ 0.76
CTNND1O60716 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.81■□□□□ 0.76
CTNND1O60716 AC087641.1-201ENST00000557561 1021 ntBASIC19.81■□□□□ 0.76
CTNND1O60716 AL031055.1-201ENST00000606362 631 ntBASIC19.81■□□□□ 0.76
CTNND1O60716 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CTNND1O60716 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTNND1O60716 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTNND1O60716 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTNND1O60716 PCDHB18P-201ENST00000524813 2368 ntBASIC19.81■□□□□ 0.76
CTNND1O60716 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTNND1O60716 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CTNND1O60716 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CTNND1O60716 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CTNND1O60716 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CTNND1O60716 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTNND1O60716 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTNND1O60716 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.81■□□□□ 0.76
CTNND1O60716 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.81■□□□□ 0.76
CTNND1O60716 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CTNND1O60716 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTNND1O60716 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTNND1O60716 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTNND1O60716 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTNND1O60716 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTNND1O60716 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTNND1O60716 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
CTNND1O60716 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CTNND1O60716 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTNND1O60716 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTNND1O60716 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTNND1O60716 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTNND1O60716 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.8■□□□□ 0.76
CTNND1O60716 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CTNND1O60716 SLC25A39P2-201ENST00000537614 270 ntBASIC19.8■□□□□ 0.76
CTNND1O60716 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.8■□□□□ 0.76
CTNND1O60716 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.8■□□□□ 0.76
CTNND1O60716 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CTNND1O60716 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CTNND1O60716 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTNND1O60716 AC239800.4-201ENST00000603712 296 ntBASIC19.8■□□□□ 0.76
CTNND1O60716 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.8■□□□□ 0.76
CTNND1O60716 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms