Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CUBNO60494 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CUBNO60494 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.49□□□□□ -0.25
CUBNO60494 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.49□□□□□ -0.25
CUBNO60494 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
CUBNO60494 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.49□□□□□ -0.25
CUBNO60494 CTBP2P3-201ENST00000585629 1255 ntBASIC13.49□□□□□ -0.25
CUBNO60494 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CUBNO60494 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUBNO60494 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CUBNO60494 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.49□□□□□ -0.25
CUBNO60494 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CUBNO60494 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUBNO60494 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUBNO60494 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.49□□□□□ -0.25
CUBNO60494 AC022210.1-201ENST00000449856 793 ntBASIC13.49□□□□□ -0.25
CUBNO60494 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CUBNO60494 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.49□□□□□ -0.25
CUBNO60494 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.48□□□□□ -0.25
CUBNO60494 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.48□□□□□ -0.25
CUBNO60494 AL355312.1-201ENST00000407115 2176 ntBASIC13.48□□□□□ -0.25
CUBNO60494 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
CUBNO60494 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.48□□□□□ -0.25
CUBNO60494 RAB43P1-201ENST00000561790 589 ntBASIC13.48□□□□□ -0.25
CUBNO60494 MIR3909-201ENST00000579518 119 ntBASIC13.48□□□□□ -0.25
CUBNO60494 MIR4515-201ENST00000584082 81 ntBASIC13.48□□□□□ -0.25
CUBNO60494 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CUBNO60494 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.48□□□□□ -0.25
CUBNO60494 AL023806.1-201ENST00000603994 1649 ntBASIC13.48□□□□□ -0.25
CUBNO60494 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CUBNO60494 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
CUBNO60494 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.48□□□□□ -0.25
CUBNO60494 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.48□□□□□ -0.25
CUBNO60494 BANF1P1-201ENST00000553684 263 ntBASIC13.48□□□□□ -0.25
CUBNO60494 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CUBNO60494 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.48□□□□□ -0.25
CUBNO60494 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.48□□□□□ -0.25
CUBNO60494 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CUBNO60494 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.47□□□□□ -0.25
CUBNO60494 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 AP006294.1-201ENST00000415407 339 ntBASIC13.47□□□□□ -0.25
CUBNO60494 RPSAP52-203ENST00000622976 1023 ntBASIC13.47□□□□□ -0.25
CUBNO60494 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CUBNO60494 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CUBNO60494 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.47□□□□□ -0.25
CUBNO60494 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CUBNO60494 AC002558.1-201ENST00000488906 803 ntBASIC13.47□□□□□ -0.25
CUBNO60494 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.47□□□□□ -0.25
CUBNO60494 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CUBNO60494 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CUBNO60494 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.47□□□□□ -0.25
CUBNO60494 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.47□□□□□ -0.25
CUBNO60494 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.47□□□□□ -0.25
CUBNO60494 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.47□□□□□ -0.25
CUBNO60494 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CUBNO60494 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.47□□□□□ -0.25
CUBNO60494 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.47□□□□□ -0.25
CUBNO60494 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CUBNO60494 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.47□□□□□ -0.25
CUBNO60494 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.47□□□□□ -0.25
CUBNO60494 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CUBNO60494 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CUBNO60494 AC027307.2-201ENST00000591252 911 ntBASIC13.47□□□□□ -0.25
CUBNO60494 CHCHD2P3-201ENST00000603038 451 ntBASIC13.47□□□□□ -0.25
CUBNO60494 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CUBNO60494 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.47□□□□□ -0.25
CUBNO60494 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUBNO60494 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms