Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.18■□□□□ 0.34
SMAD6O43541 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SMAD6O43541 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMAD6O43541 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMAD6O43541 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.18■□□□□ 0.34
SMAD6O43541 AC060834.1-201ENST00000443027 2032 ntBASIC17.18■□□□□ 0.34
SMAD6O43541 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMAD6O43541 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMAD6O43541 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMAD6O43541 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMAD6O43541 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
SMAD6O43541 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.17■□□□□ 0.34
SMAD6O43541 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.17■□□□□ 0.34
SMAD6O43541 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD6O43541 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SMAD6O43541 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD6O43541 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SMAD6O43541 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD6O43541 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD6O43541 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.17■□□□□ 0.34
SMAD6O43541 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD6O43541 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD6O43541 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD6O43541 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD6O43541 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.17■□□□□ 0.34
SMAD6O43541 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.17■□□□□ 0.34
SMAD6O43541 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.17■□□□□ 0.34
SMAD6O43541 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.17■□□□□ 0.34
SMAD6O43541 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.17■□□□□ 0.34
SMAD6O43541 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD6O43541 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.17■□□□□ 0.34
SMAD6O43541 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.17■□□□□ 0.34
SMAD6O43541 AC005829.1-201ENST00000570002 483 ntBASIC17.17■□□□□ 0.34
SMAD6O43541 AP001094.4-201ENST00000579008 2176 ntBASIC17.17■□□□□ 0.34
SMAD6O43541 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
SMAD6O43541 AC005412.3-201ENST00000580309 715 ntBASIC17.17■□□□□ 0.34
SMAD6O43541 MIR4515-201ENST00000584082 81 ntBASIC17.17■□□□□ 0.34
SMAD6O43541 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.17■□□□□ 0.34
SMAD6O43541 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.17■□□□□ 0.34
SMAD6O43541 C20orf181-201ENST00000623918 480 ntBASIC17.17■□□□□ 0.34
SMAD6O43541 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD6O43541 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD6O43541 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.17■□□□□ 0.34
SMAD6O43541 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.16■□□□□ 0.34
SMAD6O43541 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD6O43541 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.16■□□□□ 0.34
SMAD6O43541 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.16■□□□□ 0.34
SMAD6O43541 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD6O43541 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD6O43541 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD6O43541 KRT8P49-201ENST00000604166 1432 ntBASIC17.16■□□□□ 0.34
SMAD6O43541 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SMAD6O43541 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD6O43541 AC090340.1-201ENST00000620778 4980 ntBASIC17.16■□□□□ 0.34
SMAD6O43541 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD6O43541 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD6O43541 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SMAD6O43541 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.16■□□□□ 0.34
SMAD6O43541 HTR5BP-201ENST00000430851 1154 ntBASIC17.16■□□□□ 0.34
SMAD6O43541 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.16■□□□□ 0.34
SMAD6O43541 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.16■□□□□ 0.34
SMAD6O43541 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD6O43541 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD6O43541 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD6O43541 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD6O43541 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.16■□□□□ 0.34
SMAD6O43541 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD6O43541 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.16■□□□□ 0.34
SMAD6O43541 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SMAD6O43541 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SMAD6O43541 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.15■□□□□ 0.34
SMAD6O43541 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.15■□□□□ 0.34
SMAD6O43541 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.15■□□□□ 0.34
SMAD6O43541 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.15■□□□□ 0.34
SMAD6O43541 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 HMGA1P7-201ENST00000406908 502 ntBASIC17.15■□□□□ 0.34
SMAD6O43541 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.15■□□□□ 0.34
SMAD6O43541 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.15■□□□□ 0.34
SMAD6O43541 AP002472.1-201ENST00000577490 586 ntBASIC17.15■□□□□ 0.34
SMAD6O43541 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.15■□□□□ 0.34
SMAD6O43541 AC068137.2-201ENST00000605408 478 ntBASIC17.15■□□□□ 0.34
SMAD6O43541 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 AL353732.1-201ENST00000569618 1459 ntBASIC17.15■□□□□ 0.34
SMAD6O43541 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.15■□□□□ 0.34
SMAD6O43541 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SMAD6O43541 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SMAD6O43541 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD6O43541 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms