Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.44■□□□□ 0.06
SURF4O15260 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SURF4O15260 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.44■□□□□ 0.06
SURF4O15260 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SURF4O15260 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.44■□□□□ 0.06
SURF4O15260 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.44■□□□□ 0.06
SURF4O15260 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.44■□□□□ 0.06
SURF4O15260 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.44■□□□□ 0.06
SURF4O15260 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
SURF4O15260 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.44■□□□□ 0.06
SURF4O15260 AC011498.5-201ENST00000592027 486 ntBASIC15.44■□□□□ 0.06
SURF4O15260 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.44■□□□□ 0.06
SURF4O15260 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SURF4O15260 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SURF4O15260 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SURF4O15260 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SURF4O15260 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.44■□□□□ 0.06
SURF4O15260 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SURF4O15260 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SURF4O15260 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SURF4O15260 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SURF4O15260 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SURF4O15260 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SURF4O15260 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
SURF4O15260 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
SURF4O15260 AL391256.1-201ENST00000443260 1855 ntBASIC15.44■□□□□ 0.06
SURF4O15260 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SURF4O15260 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 TUBB8P12-201ENST00000308911 1335 ntBASIC15.43■□□□□ 0.06
SURF4O15260 TUBB7P-202ENST00000428444 1305 ntBASIC15.43■□□□□ 0.06
SURF4O15260 TUBB8P7-204ENST00000567960 1332 ntBASIC15.43■□□□□ 0.06
SURF4O15260 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
SURF4O15260 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.43■□□□□ 0.06
SURF4O15260 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.43■□□□□ 0.06
SURF4O15260 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.43■□□□□ 0.06
SURF4O15260 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 PCDHA1-201ENST00000378133 2726 ntBASIC15.43■□□□□ 0.06
SURF4O15260 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SURF4O15260 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SURF4O15260 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
SURF4O15260 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.43■□□□□ 0.06
SURF4O15260 KLF4P1-201ENST00000412782 1185 ntBASIC15.43■□□□□ 0.06
SURF4O15260 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SURF4O15260 BX276092.5-203ENST00000456199 560 ntBASIC15.43■□□□□ 0.06
SURF4O15260 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.43■□□□□ 0.06
SURF4O15260 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 AC090616.6-201ENST00000582640 721 ntBASIC15.43■□□□□ 0.06
SURF4O15260 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.43■□□□□ 0.06
SURF4O15260 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SURF4O15260 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SURF4O15260 AC116407.4-201ENST00000623319 1061 ntBASIC15.43■□□□□ 0.06
SURF4O15260 AL358472.4-201ENST00000633140 710 ntBASIC15.43■□□□□ 0.06
SURF4O15260 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SURF4O15260 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
SURF4O15260 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
SURF4O15260 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.43■□□□□ 0.06
SURF4O15260 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.43■□□□□ 0.06
SURF4O15260 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
SURF4O15260 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.43■□□□□ 0.06
SURF4O15260 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SURF4O15260 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SURF4O15260 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SURF4O15260 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SURF4O15260 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SURF4O15260 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SURF4O15260 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SURF4O15260 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.42■□□□□ 0.06
SURF4O15260 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SURF4O15260 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.42■□□□□ 0.06
SURF4O15260 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SURF4O15260 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SURF4O15260 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SURF4O15260 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SURF4O15260 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.42■□□□□ 0.06
SURF4O15260 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.42■□□□□ 0.06
SURF4O15260 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.42■□□□□ 0.06
SURF4O15260 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SURF4O15260 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.42■□□□□ 0.06
SURF4O15260 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.42■□□□□ 0.06
SURF4O15260 AL121672.3-201ENST00000608644 468 ntBASIC15.42■□□□□ 0.06
SURF4O15260 IGHV3-41-201ENST00000613121 348 ntBASIC15.42■□□□□ 0.06
SURF4O15260 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.42■□□□□ 0.06
SURF4O15260 AD001527.2-201ENST00000622994 785 ntBASIC15.42■□□□□ 0.06
SURF4O15260 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SURF4O15260 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SURF4O15260 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms