Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 AP002414.1-201ENST00000391405 1147 ntBASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 AC004967.1-201ENST00000453589 447 ntBASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 AC010654.1-201ENST00000615722 808 ntBASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 GGTLC5P-201ENST00000617623 998 ntBASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 AC134684.3-201ENST00000641758 218 ntBASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 AC092865.6-201ENST00000642101 219 ntBASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 AC002310.6-201ENST00000624451 1377 ntBASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA2E9PIF3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 AC016396.2-201ENST00000562575 1417 ntBASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NPIPA2E9PIF3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 AL023806.1-201ENST00000603994 1649 ntBASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 AC211486.1-202ENST00000416371 468 ntBASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 MCCD1P2-201ENST00000423228 335 ntBASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 AC211476.1-201ENST00000503899 468 ntBASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA2E9PIF3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms