Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PDIA3P1-201ENST00000471856 1510 ntBASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM88BA6NKF7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 AL031598.1-201ENST00000561511 1773 ntBASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 AC099336.1-201ENST00000417053 1171 ntBASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 SERBP1P3-201ENST00000459980 809 ntBASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 AC010319.3-201ENST00000597028 470 ntBASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 AC004461.2-201ENST00000629517 803 ntBASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM88BA6NKF7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 USP32P1-208ENST00000506594 1164 ntBASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88BA6NKF7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 MIR1247-201ENST00000408206 136 ntBASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 GPAA1P2-201ENST00000417923 928 ntBASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 FAM21FP-201ENST00000426241 1131 ntBASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 AC233724.13-201ENST00000598383 410 ntBASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 LINC00896-202ENST00000609602 2128 ntBASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 MIR8072-201ENST00000614241 80 ntBASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 AC131009.4-201ENST00000624048 1740 ntBASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEM88BA6NKF7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.52■□□□□ 0.72
TMEM88BA6NKF7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms