Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 AC079140.1-201ENST00000508039 487 ntBASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 DUX4L17-201ENST00000557360 1267 ntBASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 AC092364.2-202ENST00000597012 1073 ntBASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 EGFEM1P-202ENST00000431685 1563 ntBASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3BA6NDS4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 AC016396.2-201ENST00000562575 1417 ntBASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 AC093520.2-201ENST00000561830 333 ntBASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 AL135744.1-201ENST00000565098 629 ntBASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 RARRES2P8-201ENST00000566335 367 ntBASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 AC008764.6-201ENST00000595909 2069 ntBASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3BA6NDS4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 AC093525.9-201ENST00000624961 1746 ntBASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 AKAP8P1-201ENST00000434743 1349 ntBASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 FAM86GP-201ENST00000448322 971 ntBASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 AC243562.1-201ENST00000560672 389 ntBASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 MIR3197-201ENST00000582241 73 ntBASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3BA6NDS4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms