Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 AC002310.6-201ENST00000624451 1377 ntBASIC16.21■□□□□ 0.19
LRIT2A6NDA9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRIT2A6NDA9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRIT2A6NDA9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.21■□□□□ 0.18
LRIT2A6NDA9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
LRIT2A6NDA9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
LRIT2A6NDA9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRIT2A6NDA9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 AC098831.1-202ENST00000438821 336 ntBASIC16.2■□□□□ 0.18
LRIT2A6NDA9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRIT2A6NDA9 KRT8P49-201ENST00000604166 1432 ntBASIC16.19■□□□□ 0.18
LRIT2A6NDA9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 AC026396.1-201ENST00000419388 421 ntBASIC16.19■□□□□ 0.18
LRIT2A6NDA9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 SLC25A6P2-201ENST00000497974 877 ntBASIC16.19■□□□□ 0.18
LRIT2A6NDA9 IGHV3-22-201ENST00000520721 359 ntBASIC16.19■□□□□ 0.18
LRIT2A6NDA9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.19■□□□□ 0.18
LRIT2A6NDA9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LRIT2A6NDA9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LRIT2A6NDA9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.18■□□□□ 0.18
LRIT2A6NDA9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT2A6NDA9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT2A6NDA9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT2A6NDA9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.18■□□□□ 0.18
LRIT2A6NDA9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT2A6NDA9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT2A6NDA9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.18■□□□□ 0.18
LRIT2A6NDA9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT2A6NDA9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT2A6NDA9 TOP3BP1-201ENST00000420768 1380 ntBASIC16.18■□□□□ 0.18
LRIT2A6NDA9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.18■□□□□ 0.18
LRIT2A6NDA9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT2A6NDA9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.18■□□□□ 0.18
LRIT2A6NDA9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms