Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC020916.1-201ENST00000587762 1774 ntBASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC006504.4-201ENST00000592118 1568 ntBASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ZNF259P1-201ENST00000407656 1365 ntBASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 OR6D1P-203ENST00000641209 4860 ntBASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AP002414.1-201ENST00000391405 1147 ntBASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ELK2BP-201ENST00000415014 1224 ntBASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AP002414.3-201ENST00000589352 1468 ntBASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC104109.2-201ENST00000602919 1418 ntBASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC073621.1-201ENST00000392730 636 ntBASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AL805961.1-202ENST00000641562 540 ntBASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.52■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms