Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 GCSHP5-201ENST00000443090 522 ntBASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 ECEL1P2-202ENST00000465689 757 ntBASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 AC068472.1-201ENST00000474589 881 ntBASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 FAM87A-204ENST00000613235 858 ntBASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 AC079602.3-201ENST00000623931 403 ntBASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 HLA-A-202ENST00000376806 1854 ntBASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV18A0A075B6X5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 CYP2D8P-201ENST00000433633 1490 ntBASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 AC103702.1-201ENST00000548801 2630 ntBASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV18A0A075B6X5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 AC097374.2-201ENST00000618617 1306 ntBASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 ECEL1P3-201ENST00000427961 737 ntBASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV18A0A075B6X5 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV18A0A075B6X5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV18A0A075B6X5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
TRAV18A0A075B6X5 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV18A0A075B6X5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
TRAV18A0A075B6X5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV18A0A075B6X5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms