Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCH2Q9Y6C5 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTCH2Q9Y6C5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTCH2Q9Y6C5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PTCH2Q9Y6C5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.08■□□□□ 0.65
PTCH2Q9Y6C5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PTCH2Q9Y6C5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.08■□□□□ 0.65
PTCH2Q9Y6C5 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PTCH2Q9Y6C5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.08■□□□□ 0.65
PTCH2Q9Y6C5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PTCH2Q9Y6C5 AC135776.1-201ENST00000319817 2481 ntBASIC19.08■□□□□ 0.65
PTCH2Q9Y6C5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTCH2Q9Y6C5 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 HCG4-201ENST00000418983 998 ntBASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 AL139327.4-201ENST00000612362 153 ntBASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 AP000997.3-201ENST00000623333 2250 ntBASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PTCH2Q9Y6C5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 AC135586.1-201ENST00000539323 574 ntBASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 AC092552.1-201ENST00000547243 906 ntBASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 MIR3909-201ENST00000579518 119 ntBASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 CHCHD2P3-201ENST00000603038 451 ntBASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCH2Q9Y6C5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 AC009113.1-201ENST00000570267 2443 ntBASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 REXO1L6P-201ENST00000603433 1515 ntBASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 AC105233.2-201ENST00000523697 349 ntBASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 AF228730.5-201ENST00000530288 346 ntBASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCH2Q9Y6C5 REXO1L11P-201ENST00000620964 1927 ntBASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms