Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 AP001160.2-201ENST00000596071 487 ntBASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA6Q9Y5G7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 AC100803.2-201ENST00000562459 1963 ntBASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 NCF1C-201ENST00000438382 1427 ntBASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 AC132938.5-201ENST00000624980 1813 ntBASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 AC003669.1-201ENST00000334569 611 ntBASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA6Q9Y5G7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 AC018695.7-201ENST00000624587 2492 ntBASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 AC004967.1-201ENST00000453589 447 ntBASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 AC116407.2-201ENST00000613639 860 ntBASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms