Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 PRYP5-201ENST00000451909 266 ntBASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 RPL13AP23-201ENST00000480739 586 ntBASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 AD001527.2-201ENST00000622994 785 ntBASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.21■□□□□ 0.19
PCDHGB6Q9Y5F9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
PCDHGB6Q9Y5F9 PMPCAP1-201ENST00000508114 1576 ntBASIC16.21■□□□□ 0.18
PCDHGB6Q9Y5F9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.21■□□□□ 0.18
PCDHGB6Q9Y5F9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
PCDHGB6Q9Y5F9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.21■□□□□ 0.18
PCDHGB6Q9Y5F9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHGB6Q9Y5F9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.21■□□□□ 0.18
PCDHGB6Q9Y5F9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 AC079776.2-201ENST00000641154 1609 ntBASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 IGHV3-22-201ENST00000520721 359 ntBASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 SLC25A1P1-201ENST00000528351 927 ntBASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 NKAPP1-205ENST00000585790 367 ntBASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 AL049840.3-201ENST00000602669 611 ntBASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 AC025062.2-201ENST00000605477 670 ntBASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 LINC01451-201ENST00000623792 534 ntBASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 AC107918.4-202ENST00000641623 219 ntBASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB6Q9Y5F9 SIGLEC16-201ENST00000599858 1437 ntBASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 OR6D1P-203ENST00000641209 4860 ntBASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 COX5BP2-201ENST00000392354 334 ntBASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGB6Q9Y5F9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms