Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 LINC00895-201ENST00000629028 1637 ntBASIC23.18■■□□□ 1.3
NINLQ9Y2I6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
NINLQ9Y2I6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 AC079140.1-201ENST00000508039 487 ntBASIC23.17■■□□□ 1.3
NINLQ9Y2I6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 AC243562.1-201ENST00000560672 389 ntBASIC23.17■■□□□ 1.3
NINLQ9Y2I6 AC108860.2-201ENST00000562760 2183 ntBASIC23.17■■□□□ 1.3
NINLQ9Y2I6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 CYP2A7P1-201ENST00000595391 815 ntBASIC23.17■■□□□ 1.3
NINLQ9Y2I6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 AC084121.4-201ENST00000641598 221 ntBASIC23.17■■□□□ 1.3
NINLQ9Y2I6 AF228730.8-201ENST00000642140 221 ntBASIC23.17■■□□□ 1.3
NINLQ9Y2I6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC23.17■■□□□ 1.3
NINLQ9Y2I6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 SIGLEC29P-201ENST00000599873 1114 ntBASIC23.16■■□□□ 1.3
NINLQ9Y2I6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NINLQ9Y2I6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 AC013467.2-201ENST00000605472 835 ntBASIC23.15■■□□□ 1.3
NINLQ9Y2I6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms